ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107948380	uncharacterized LOC107948380
vvi-u.5	100855344	uncharacterized LOC100855344
ppo-u.5	7487376	uncharacterized LOC7487376
ppo-u.5	18099387	uncharacterized LOC18099387
osa-u.5	4338931	uncharacterized LOC4338931
zma-u.5	100382900	uncharacterized LOC100382900
zma-u.5	103632442	uncharacterized LOC103632442

functional annotation

KEGG

GO BP

GO:0048193 [list] [network] Golgi vesicle transport

(472 genes)

IEA

GO CC

GO:0016020 [list] [network] membrane

(8195 genes)

IEA

GO MF

Protein

XP_016738398.1 [sequence] [blastp]
XP_040967244.1 [sequence] [blastp]
XP_040967245.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 2, cyto 1, plas 1, vacu 1, E.R. 1, chlo_mito 1, E.R._vacu 1, E.R._plas 1, cyto_E.R. 1, cyto_plas 1	(predict for XP_016738398.1)
E.R. 4, plas 3, golg 2, cyto_E.R. 2	(predict for XP_040967244.1)
golg 4, nucl 3, chlo 1, cysk_nucl 1	(predict for XP_040967245.1)

Subcellular
localization
TargetP

other 7	(predict for XP_016738398.1)
other 9	(predict for XP_040967244.1)
other 9	(predict for XP_040967245.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107948380	vvi-u.5 for 100855344	ppo-u.5 for 7487376	ppo-u.5 for 18099387	osa-u.5 for 4338931	zma-u.5 for 100382900	zma-u.5 for 103632442

Ortholog ID: 13278

Species

ghi

cit

vvi

ppo

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107948380

uncharacterized LOC107949455

uncharacterized LOC102623653

uncharacterized LOC100855344

uncharacterized LOC7487376

uncharacterized LOC18099387

uncharacterized LOC4338931

uncharacterized LOC103632442

uncharacterized LOC100382900

uncharacterized LOC123182176

ferredoxin

uncharacterized LOC123446236

uncharacterized LOC8060374

uncharacterized LOC100830107

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2
ppo03018	RNA degradation	2
ppo03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03015	mRNA surveillance pathway	2
zma04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04120	Ubiquitin mediated proteolysis	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	6
tae01200	Carbon metabolism	6
tae00195	Photosynthesis	5
tae00480	Glutathione metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	2
bdi01240	Biosynthesis of cofactors	2

Expression

Expression pattern

Entrez Gene ID^*

107948380

107949455

102623653

100855344

7487376

18099387

4338931

103632442

100382900

123182176

542942

123446236

8060374

100830107

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107948380 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107948380 (ghi-r.1 coexpression data)


Species	ghi	vvi	ppo	osa	zma	bdi	mtr	bra	hvu	cit	gma	bna	ath	sbi	sly	sot	nta	cre	tae
Paralog	1	1	2	1	2	0	0	0	0	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107948380 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107948380 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**