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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948528   translocon-associated protein subunit beta 
 ghi-r.1   107937118   translocon-associated protein subunit beta 
 ghi-r.1   107948505   translocon-associated protein subunit beta 
 ghi-r.1   107914015   translocon-associated protein subunit beta 
 ath-u.5   AT5G14030   translocon-associated protein beta (TRAPB) family protein 
 bra-r.6   103846518   translocon-associated protein subunit beta 
 bra-r.6   103850914   translocon-associated protein subunit beta 
 bra-r.6   103854291   uncharacterized LOC103854291 
 bna-r.1   106431306   translocon-associated protein subunit beta 
 bna-r.1   125593122   translocon-associated protein subunit beta-like 
 bna-r.1   106372248   translocon-associated protein subunit beta 
 cit-r.1   102615464   uncharacterized LOC102615464 
 gma-u.5   100500066   translocon-associated protein subunit beta-like 
 gma-u.5   100306406   uncharacterized LOC100306406 
 vvi-u.5   100241257   uncharacterized LOC100241257 
 vvi-u.5   100244388   uncharacterized LOC100244388 
 ppo-u.5   7461631   uncharacterized LOC7461631 
 ppo-u.5   18107126   uncharacterized LOC18107126 
 mtr-u.5   11443082   translocon-associated protein subunit beta 
 sly-u.5   101259897   uncharacterized LOC101259897 
 sot-r.1   102594422   translocon-associated protein subunit beta-like 
 sot-r.1   102586746   translocon-associated protein subunit beta-like 
 nta-r.1   107789931   uncharacterized LOC107789931 
 nta-r.1   107801583   uncharacterized LOC107801583 
 nta-r.1   107808814   uncharacterized LOC107808814 
 osa-u.5   4326440   uncharacterized LOC4326440 
 osa-u.5   4337538   uncharacterized LOC4337538 
 zma-u.5   100283273   uncharacterized LOC100283273 
 zma-u.5   100272685   uncharacterized LOC100272685 
 tae-r.2   123060204   translocon-associated protein subunit beta 
 tae-r.2   123068698   translocon-associated protein subunit beta 
 tae-r.2   123077209   translocon-associated protein subunit beta 
 hvu-r.1   123442740   translocon-associated protein subunit beta 
 sbi-r.1   110429913   translocon-associated protein subunit beta 
 bdi-r.1   100822025   translocon-associated protein subunit beta 
 bdi-r.1   100840423   translocon-associated protein subunit beta 

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Top 50 coexpressed genes to 107948528 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948528 (ghi-r.1 coexpression data)

CoexMap"107948528"


ghiLOC107948528 | Entrez gene ID : 107948528    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 1 3 3 1 2 2 2 1 1 2 3 2 2 3 1 1 2 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1428 genes)  IEA  
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
Protein XP_016738605.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  plas 1,  extr 1,  mito 1,  pero 1,  nucl_plas 1,  golg_plas 1,  cysk_plas 1,  E.R._plas 1,  cyto_plas 1  (predict for XP_016738605.1)
Subcellular
localization
TargetP
scret 9  (predict for XP_016738605.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948528
ghi-r.1
for
107937118
ghi-r.1
for
107948505
ghi-r.1
for
107914015
ath-u.5
for
AT5G14030
bra-r.6
for
103846518
bra-r.6
for
103850914
bra-r.6
for
103854291
bna-r.1
for
106431306
bna-r.1
for
125593122
bna-r.1
for
106372248
cit-r.1
for
102615464
gma-u.5
for
100500066
gma-u.5
for
100306406
vvi-u.5
for
100241257
vvi-u.5
for
100244388
ppo-u.5
for
7461631
ppo-u.5
for
18107126
mtr-u.5
for
11443082
sly-u.5
for
101259897
sot-r.1
for
102594422
sot-r.1
for
102586746
nta-r.1
for
107789931
nta-r.1
for
107801583
nta-r.1
for
107808814
osa-u.5
for
4326440
osa-u.5
for
4337538
zma-u.5
for
100283273
zma-u.5
for
100272685
tae-r.2
for
123060204
tae-r.2
for
123068698
tae-r.2
for
123077209
hvu-r.1
for
123442740
sbi-r.1
for
110429913
bdi-r.1
for
100822025
bdi-r.1
for
100840423


Ortholog ID: 3839
Species ghi ghi ghi ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu sbi bdi bdi
Symbol LOC107937118 LOC107914015 LOC107888437 AT5G14030 LOC103846518 LOC103850914 LOC103856052 LOC106431306 LOC125593122 LOC106372248 LOC102615464 LOC100500066 LOC100306406 LOC100241257 LOC100244388 LOC7461631 LOC18107126 LOC11443082 LOC101259897 LOC102594422 LOC102586746 LOC107789931 LOC107808814 LOC107816303 LOC4326440 LOC4337538 LOC100283273 LOC100272685 LOC123060204 LOC123068698 LOC123077209 LOC123442740 LOC110429913 LOC100822025 LOC100840423
Function* translocon-associated protein subunit beta translocon-associated protein subunit beta uncharacterized LOC107888437 translocon-associated protein beta (TRAPB) family protein translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta-like translocon-associated protein subunit beta uncharacterized LOC102615464 translocon-associated protein subunit beta-like uncharacterized LOC100306406 uncharacterized LOC100241257 uncharacterized LOC100244388 uncharacterized LOC7461631 uncharacterized LOC18107126 translocon-associated protein subunit beta uncharacterized LOC101259897 translocon-associated protein subunit beta-like translocon-associated protein subunit beta-like uncharacterized LOC107789931 uncharacterized LOC107808814 uncharacterized LOC107816303 uncharacterized LOC4326440 uncharacterized LOC4337538 uncharacterized LOC100283273 uncharacterized LOC100272685 translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta translocon-associated protein subunit beta
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00900 Terpenoid backbone biosynthesis 3
ghi03013 Nucleocytoplasmic transport 2
ghi00600 Sphingolipid metabolism 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 12
ghi04141 Protein processing in endoplasmic reticulum 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
ghi00940 Phenylpropanoid biosynthesis 3
ghi00905 Brassinosteroid biosynthesis 2
ghi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 8
ath00510 N-Glycan biosynthesis 3
ath00513 Various types of N-glycan biosynthesis 3
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 7
bra03060 Protein export 4
bra04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 8
bra03060 Protein export 5
bra04145 Phagosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 8
bra04145 Phagosome 6
bra03060 Protein export 5
bra04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04146 Peroxisome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00020 Citrate cycle (TCA cycle) 2
cit00640 Propanoate metabolism 2
cit01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 8
gma03060 Protein export 4
gma04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 11
gma04145 Phagosome 6
gma03060 Protein export 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 14
vvi04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 13
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 12
ppo04145 Phagosome 3
ppo03060 Protein export 2
ppo04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 11
ppo00190 Oxidative phosphorylation 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 7
mtr00510 N-Glycan biosynthesis 4
mtr00513 Various types of N-glycan biosynthesis 4
mtr03050 Proteasome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 7
sly03060 Protein export 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 11
sot00510 N-Glycan biosynthesis 5
sot00513 Various types of N-glycan biosynthesis 5
sot03060 Protein export 4
sot04145 Phagosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 9
nta04145 Phagosome 4
nta04142 Lysosome 2
nta00190 Oxidative phosphorylation 2
nta04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta03010 Ribosome 2
nta00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 6
osa03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 11
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 7
zma03060 Protein export 4
zma04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04141 Protein processing in endoplasmic reticulum 6
zma03060 Protein export 3
zma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 6
tae03060 Protein export 3
tae00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 6
hvu00520 Amino sugar and nucleotide sugar metabolism 3
hvu00020 Citrate cycle (TCA cycle) 2
hvu00710 Carbon fixation by Calvin cycle 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 7
sbi04120 Ubiquitin mediated proteolysis 2
sbi03060 Protein export 2
sbi04145 Phagosome 2
sbi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi03060 Protein export 5
bdi00510 N-Glycan biosynthesis 2
bdi00513 Various types of N-glycan biosynthesis 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 8
bdi03060 Protein export 4
bdi00510 N-Glycan biosynthesis 3
bdi00513 Various types of N-glycan biosynthesis 3
bdi04145 Phagosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107937118 107914015 107888437 831251 103846518 103850914 103856052 106431306 125593122 106372248 102615464 100500066 100306406 100241257 100244388 7461631 18107126 11443082 101259897 102594422 102586746 107789931 107808814 107816303 4326440 4337538 100283273 100272685 123060204 123068698 123077209 123442740 110429913 100822025 100840423
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