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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107948710   two-component response regulator ARR12 
 ghi-r.1   107893462   two-component response regulator ARR12 
 ghi-r.1   107888395   two-component response regulator ARR12 
 ghi-r.1   107959002   two-component response regulator ARR12 
 ath-u.5   RR12   response regulator 12 
 ath-u.5   RR10   response regulator 10 
 bra-r.6   103862099   two-component response regulator ARR10 
 bra-r.6   103864613   two-component response regulator ARR12 
 bna-r.1   106420511   two-component response regulator ARR10-like 
 bna-r.1   106356389   two-component response regulator ARR1 
 cit-r.1   102621408   two-component response regulator ARR12 
 cit-r.1   102627007   two-component response regulator ARR10-like 
 cit-r.1   102630133   two-component response regulator ORR24 
 gma-u.5   100795697   two-component response regulator ARR12 
 gma-u.5   100809002   two-component response regulator ARR12 
 gma-u.5   100807822   two-component response regulator ARR12 
 vvi-u.5   100259369   two-component response regulator ARR12 
 vvi-u.5   100250889   two-component response regulator ARR12 
 ppo-u.5   7458409   two-component response regulator ARR12 
 ppo-u.5   7479549   two-component response regulator ARR12 
 mtr-u.5   120575837   two-component response regulator ARR12 
 sly-u.5   101246797   two-component response regulator ORR24-like 
 sly-u.5   101258668   two-component response regulator ORR24 
 sot-r.1   102587717   two-component response regulator ORR24-like 
 sot-r.1   102598455   two-component response regulator ORR24-like 
 nta-r.1   107819882   two-component response regulator ARR12 
 nta-r.1   107809339   two-component response regulator ORR24 
 nta-r.1   107794210   two-component response regulator ORR24 
 osa-u.5   4340320   two-component response regulator ORR22-like 
 osa-u.5   4331008   two-component response regulator ORR23-like 
 osa-u.5   4328516   two-component response regulator ORR24-like 
 zma-u.5   100274010   uncharacterized LOC100274010 
 zma-u.5   100191412   Putative two-component response regulator family protein 
 zma-u.5   541638   response regulator 9 
 tae-r.2   123144042   two-component response regulator ORR24 
 tae-r.2   123139134   two-component response regulator ORR23 
 hvu-r.1   123401281   two-component response regulator ORR24-like 
 hvu-r.1   123402747   two-component response regulator ORR23-like 
 hvu-r.1   123410485   two-component response regulator ORR22-like 
 sbi-r.1   8076203   two-component response regulator ORR22 
 sbi-r.1   8079408   two-component response regulator ORR24 
 sbi-r.1   8084640   two-component response regulator ORR23 
 bdi-r.1   100828175   two-component response regulator ORR22 
 bdi-r.1   100829000   two-component response regulator ORR23 
 bdi-r.1   100846210   two-component response regulator ORR24 
 cre-r.1   CHLRE_05g243000v5   uncharacterized protein 

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Top 50 coexpressed genes to 107948710 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107948710 (ghi-r.1 coexpression data)

CoexMap"107948710"


ghiLOC107948710 | Entrez gene ID : 107948710    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 2 3 3 2 2 1 2 2 3 3 3 2 3 3 3 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009736 [list] [network] cytokinin-activated signaling pathway  (133 genes)  IEA  
GO:0000160 [list] [network] phosphorelay signal transduction system  (327 genes)  IEA  
GO CC
GO MF
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
Protein XP_016738829.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_016738829.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016738829.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107948710
ghi-r.1
for
107893462
ghi-r.1
for
107888395
ghi-r.1
for
107959002
ath-u.5
for
RR12
ath-u.5
for
RR10
bra-r.6
for
103862099
bra-r.6
for
103864613
bna-r.1
for
106420511
bna-r.1
for
106356389
cit-r.1
for
102621408
cit-r.1
for
102627007
cit-r.1
for
102630133
gma-u.5
for
100795697
gma-u.5
for
100809002
gma-u.5
for
100807822
vvi-u.5
for
100259369
vvi-u.5
for
100250889
ppo-u.5
for
7458409
ppo-u.5
for
7479549
mtr-u.5
for
120575837
sly-u.5
for
101246797
sly-u.5
for
101258668
sot-r.1
for
102587717
sot-r.1
for
102598455
nta-r.1
for
107819882
nta-r.1
for
107809339
nta-r.1
for
107794210
osa-u.5
for
4340320
osa-u.5
for
4331008
osa-u.5
for
4328516
zma-u.5
for
100274010
zma-u.5
for
100191412
zma-u.5
for
541638
tae-r.2
for
123144042
tae-r.2
for
123139134
hvu-r.1
for
123401281
hvu-r.1
for
123402747
hvu-r.1
for
123410485
sbi-r.1
for
8076203
sbi-r.1
for
8079408
sbi-r.1
for
8084640
bdi-r.1
for
100828175
bdi-r.1
for
100829000
bdi-r.1
for
100846210
cre-r.1
for
CHLRE_05g243000v5


Ortholog ID: 949
Species ghi ghi ath ath bra bra bna bna cit cit cit gma gma gma vvi vvi ppo ppo ppo mtr mtr sly sly sot sot nta nta nta osa osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107888395 LOC107906846 RR12 RR10 LOC103862099 LOC103864613 LOC106420511 LOC106453574 LOC102621408 LOC102627007 LOC102630133 LOC100795697 LOC100809002 LOC100803879 LOC100259369 LOC100250889 LOC7458409 LOC7489144 LOC7489463 LOC11436036 LOC25489924 LOC101246797 LOC101258668 LOC102587717 LOC102598455 LOC107819882 LOC107809339 LOC107794210 LOC4340320 LOC4331008 LOC4328516 LOC100274010 LOC100191412 LOC541638 LOC123136533 LOC123150629 LOC123401281 LOC123410485 LOC123412987 LOC8076203 LOC8079408 LOC8084640 LOC100828175 LOC100829000 CHLRE_05g243000v5
Function* two-component response regulator ARR12 two-component response regulator ARR12 response regulator 12 response regulator 10 two-component response regulator ARR10 two-component response regulator ARR12 two-component response regulator ARR10-like two-component response regulator ARR10-like two-component response regulator ARR12 two-component response regulator ARR10-like two-component response regulator ORR24 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ARR12 two-component response regulator ORR23 two-component response regulator ORR24-like two-component response regulator ORR24 two-component response regulator ORR24-like two-component response regulator ORR24-like two-component response regulator ARR12 two-component response regulator ORR24 two-component response regulator ORR24 two-component response regulator ORR22-like two-component response regulator ORR23-like two-component response regulator ORR24-like uncharacterized LOC100274010 Putative two-component response regulator family protein response regulator 9 two-component response regulator ORR24 two-component response regulator ORR22 two-component response regulator ORR24-like two-component response regulator ORR22-like two-component response regulator ORR22-like two-component response regulator ORR22 two-component response regulator ORR24 two-component response regulator ORR23 two-component response regulator ORR22 two-component response regulator ORR23 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03410 Base excision repair 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 4
bna04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03082 ATP-dependent chromatin remodeling 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 4
gma04016 MAPK signaling pathway - plant 2
gma00511 Other glycan degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 7
gma00591 Linoleic acid metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 11
ppo04016 MAPK signaling pathway - plant 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03250 Viral life cycle - HIV-1 3
sly03040 Spliceosome 2
sly03015 mRNA surveillance pathway 2
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 4
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
nta00010 Glycolysis / Gluconeogenesis 2
nta00030 Pentose phosphate pathway 2
nta00051 Fructose and mannose metabolism 2
nta00052 Galactose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
osa04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00030 Pentose phosphate pathway 2
hvu00480 Glutathione metabolism 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00410 beta-Alanine metabolism 2
sbi00230 Purine metabolism 2
sbi01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107888395 107906846 817056 829322 103862099 103864613 106420511 106453574 102621408 102627007 102630133 100795697 100809002 100803879 100259369 100250889 7458409 7489144 7489463 11436036 25489924 101246797 101258668 102587717 102598455 107819882 107809339 107794210 4340320 4331008 4328516 100274010 100191412 541638 123136533 123150629 123401281 123410485 123412987 8076203 8079408 8084640 100828175 100829000 5726283
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