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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107950499   probable E3 ubiquitin-protein ligase EDA40 
 ath-u.5   WAVH1   Zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   EDA40   Zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   AT5G49665   Zinc finger (C3HC4-type RING finger) family protein 
 gma-u.5   100782780   E3 ubiquitin-protein ligase WAV3 
 gma-u.5   100779269   probable E3 ubiquitin-protein ligase EDA40 
 gma-u.5   100794888   probable E3 ubiquitin-protein ligase EDA40 
 vvi-u.5   100245763   E3 ubiquitin-protein ligase WAV3 
 vvi-u.5   100253915   E3 ubiquitin-protein ligase WAV3 
 mtr-u.5   11442306   E3 ubiquitin-protein ligase WAV3 
 mtr-u.5   25495007   probable E3 ubiquitin-protein ligase EDA40 
 mtr-u.5   11446497   E3 ubiquitin-protein ligase WAVH1 
 sly-u.5   101250463   E3 ubiquitin-protein ligase WAVH1-like 
 sly-u.5   101266631   E3 ubiquitin-protein ligase WAV3 
 osa-u.5   4334888   E3 ubiquitin-protein ligase WAV3 
 zma-u.5   103646890   Zinc finger (C3HC4-type RING finger) family protein 
 zma-u.5   100281465   protein binding protein 

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Top 50 coexpressed genes to 107950499 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107950499 (ghi-r.1 coexpression data)

CoexMap"107950499"


ghiLOC107950499 | Entrez gene ID : 107950499    
Species ghi ath gma vvi mtr sly osa zma bdi hvu bra cit bna ppo sbi sot nta cre tae
Paralog 1 3 3 2 3 2 1 2 0 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016740837.2 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  mito 2,  chlo 1,  mito_plas 1  (predict for XP_016740837.2)
Subcellular
localization
TargetP
other 5  (predict for XP_016740837.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107950499
ath-u.5
for
WAVH1
ath-u.5
for
EDA40
ath-u.5
for
AT5G49665
gma-u.5
for
100782780
gma-u.5
for
100779269
gma-u.5
for
100794888
vvi-u.5
for
100245763
vvi-u.5
for
100253915
mtr-u.5
for
11442306
mtr-u.5
for
25495007
mtr-u.5
for
11446497
sly-u.5
for
101250463
sly-u.5
for
101266631
osa-u.5
for
4334888
zma-u.5
for
103646890
zma-u.5
for
100281465


Ortholog ID: 2385
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi mtr mtr sly sly sot sot nta nta osa zma zma tae tae hvu sbi bdi
Symbol LOC107942181 LOC107957856 WAVH2 WAVH1 LOC103864375 LOC103862591 LOC106392108 LOC111213636 LOC102624669 LOC102627787 LOC100779269 LOC100794888 LOC100245763 LOC100253915 LOC11442306 LOC25495007 LOC101250463 LOC101266631 LOC102596867 LOC102587194 LOC107781928 LOC107813443 LOC4334888 LOC100281465 LOC103646890 LOC123051159 LOC123187114 LOC123424448 LOC8056945 LOC100836418
Function* E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 Zinc finger (C3HC4-type RING finger) family protein Zinc finger (C3HC4-type RING finger) family protein E3 ubiquitin-protein ligase WAVH1 probable E3 ubiquitin-protein ligase EDA40 E3 ubiquitin-protein ligase WAVH1-like probable E3 ubiquitin-protein ligase WAVH2 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAVH1-like probable E3 ubiquitin-protein ligase EDA40 probable E3 ubiquitin-protein ligase EDA40 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 probable E3 ubiquitin-protein ligase EDA40 E3 ubiquitin-protein ligase WAVH1-like E3 ubiquitin-protein ligase WAV3 uncharacterized LOC102596867 uncharacterized LOC102587194 E3 ubiquitin-protein ligase WAV3-like E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 protein binding protein Zinc finger (C3HC4-type RING finger) family protein E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 E3 ubiquitin-protein ligase WAV3 uncharacterized LOC8056945 uncharacterized LOC100836418
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 2
cit04517 IgSF CAM signaling 2
cit04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04016 MAPK signaling pathway - plant 2
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta00541 Biosynthesis of various nucleotide sugars 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 5
zma04016 MAPK signaling pathway - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 4
zma04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00940 Phenylpropanoid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00630 Glyoxylate and dicarboxylate metabolism 3
tae01200 Carbon metabolism 3
tae00260 Glycine, serine and threonine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 6
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107942181 107957856 836695 816799 103864375 103862591 106392108 111213636 102624669 102627787 100779269 100794888 100245763 100253915 11442306 25495007 101250463 101266631 102596867 102587194 107781928 107813443 4334888 100281465 103646890 123051159 123187114 123424448 8056945 100836418
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