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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107950676   transcription factor bHLH87 
 ghi-r.1   107951810   transcription factor bHLH87 
 ath-u.5   AT3G21330   basic helix-loop-helix (bHLH) DNA-binding superfamily protein 
 gma-u.5   100793975   transcription factor bHLH87 
 gma-u.5   100775192   transcription factor bHLH87 
 gma-u.5   100778004   transcription factor bHLH87 
 vvi-u.5   100251455   transcription factor bHLH87 
 mtr-u.5   25500381   transcription factor bHLH87 
 mtr-u.5   11427152   transcription factor bHLH87 
 sly-u.5   101250001   transcription factor bHLH87 
 sot-r.1   102600649   transcription factor bHLH87 
 nta-r.1   107789384   transcription factor bHLH87-like 

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Top 50 coexpressed genes to 107950676 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107950676 (ghi-r.1 coexpression data)

CoexMap"107950676"


ghiLOC107950676 | Entrez gene ID : 107950676    
Species ghi ath gma vvi mtr sly sot nta bra zma cre ppo sbi cit tae bna osa hvu bdi
Paralog 2 1 3 1 2 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO MF
GO:0046983 [list] [network] protein dimerization activity  (1206 genes)  IEA  
GO:0003700 [list] [network] DNA-binding transcription factor activity  (3140 genes)  IEA  
Protein XP_016741053.1 [sequence] [blastp]
XP_016741054.1 [sequence] [blastp]
XP_040945683.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  cyto_nucl 4,  cysk 1,  golg 1  (predict for XP_016741053.1)
nucl 8,  cyto_nucl 4,  cysk 1,  golg 1  (predict for XP_016741054.1)
nucl 8,  cyto_nucl 4,  cysk 1,  golg 1  (predict for XP_040945683.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016741053.1)
other 9  (predict for XP_016741054.1)
other 9  (predict for XP_040945683.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107950676
ghi-r.1
for
107951810
ath-u.5
for
AT3G21330
gma-u.5
for
100793975
gma-u.5
for
100775192
gma-u.5
for
100778004
vvi-u.5
for
100251455
mtr-u.5
for
25500381
mtr-u.5
for
11427152
sly-u.5
for
101250001
sot-r.1
for
102600649
nta-r.1
for
107789384


Ortholog ID: 10106
Species ghi ghi ath gma gma gma vvi mtr mtr sly sot nta
Symbol LOC107950676 LOC107951810 AT3G21330 LOC100793975 LOC100775192 LOC100778004 LOC100251455 LOC25500381 LOC11427152 LOC101250001 LOC102600649 LOC107789384
Function* transcription factor bHLH87 transcription factor bHLH87 basic helix-loop-helix (bHLH) DNA-binding superfamily protein transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87 transcription factor bHLH87-like
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 7
ath00380 Tryptophan metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00330 Arginine and proline metabolism 2
gma00480 Glutathione metabolism 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00750 Vitamin B6 metabolism 2
vvi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr02010 ABC transporters 3
mtr04981 Folate transport and metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00500 Starch and sucrose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
nta04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107950676 107951810 821687 100793975 100775192 100778004 100251455 25500381 11427152 101250001 102600649 107789384
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