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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951661   nuclear transcription factor Y subunit B 
 ghi-r.1   107950379   nuclear transcription factor Y subunit B-3 
 cit-r.1   102607711   nuclear transcription factor Y subunit B-3-like 
 gma-u.5   100797721   nuclear transcription factor Y subunit B-10 
 gma-u.5   100810059   nuclear transcription factor Y subunit B-2 
 ppo-u.5   7486332   nuclear transcription factor Y subunit B-3 
 mtr-u.5   11436173   nuclear transcription factor Y subunit B-3 
 sly-u.5   104646961   nuclear transcription factor Y subunit B-1-like 
 sot-r.1   102588708   nuclear transcription factor Y subunit B-3-like 
 nta-r.1   107761852   nuclear transcription factor Y subunit B-1-like 
 nta-r.1   107810290   nuclear transcription factor Y subunit B-1 

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Top 50 coexpressed genes to 107951661 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951661 (ghi-r.1 coexpression data)

CoexMap"107951661"


ghiLOC107951661 | Entrez gene ID : 107951661    
Species ghi cit gma ppo mtr sly sot nta vvi bdi osa tae bna zma cre sbi bra ath hvu
Paralog 2 1 2 1 1 1 1 2 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006357 [list] [network] regulation of transcription by RNA polymerase II  (1121 genes)  IEA  
GO CC
GO:0016602 [list] [network] CCAAT-binding factor complex  (61 genes)  IEA  
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0001228 [list] [network] DNA-binding transcription activator activity, RNA polymerase II-specific  (40 genes)  IEA  
GO:0046982 [list] [network] protein heterodimerization activity  (254 genes)  IEA  
GO:0000978 [list] [network] RNA polymerase II cis-regulatory region sequence-specific DNA binding  (605 genes)  IEA  
Protein XP_016742278.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto_nucl 4,  pero 3  (predict for XP_016742278.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016742278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951661
ghi-r.1
for
107950379
cit-r.1
for
102607711
gma-u.5
for
100797721
gma-u.5
for
100810059
ppo-u.5
for
7486332
mtr-u.5
for
11436173
sly-u.5
for
104646961
sot-r.1
for
102588708
nta-r.1
for
107761852
nta-r.1
for
107810290


Ortholog ID: 14217
Species ghi ghi cit gma gma ppo mtr sly sot nta nta
Symbol LOC107951661 LOC107950379 LOC102607711 LOC100797721 LOC100810059 LOC7486332 LOC11436173 LOC104646961 LOC102588708 LOC107761852 LOC107810290
Function* nuclear transcription factor Y subunit B nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B-3-like nuclear transcription factor Y subunit B-10 nuclear transcription factor Y subunit B-2 nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B-3 nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-3-like nuclear transcription factor Y subunit B-1-like nuclear transcription factor Y subunit B-1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
gma03083 Polycomb repressive complex 2
gma04120 Ubiquitin mediated proteolysis 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 6
sly04016 MAPK signaling pathway - plant 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107951661 107950379 102607711 100797721 100810059 7486332 11436173 104646961 102588708 107761852 107810290
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