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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107951960   probable E3 ubiquitin-protein ligase XERICO 
 ghi-r.1   107916913   probable E3 ubiquitin-protein ligase XERICO 
 ghi-r.1   107921230   probable E3 ubiquitin-protein ligase XERICO 
 ghi-r.1   107923011   probable E3 ubiquitin-protein ligase XERICO 
 ath-u.5   XERICO   RING/U-box superfamily protein 
 ath-u.5   AT1G24580   RING/U-box superfamily protein 
 bra-r.6   117125660   probable E3 ubiquitin-protein ligase XERICO 
 bra-r.6   103828541   probable E3 ubiquitin-protein ligase XERICO 
 bra-r.6   103860295   probable E3 ubiquitin-protein ligase XERICO 
 bna-r.1   106361820   probable E3 ubiquitin-protein ligase XERICO 
 bna-r.1   106366671   probable E3 ubiquitin-protein ligase XERICO 
 bna-r.1   106395035   probable E3 ubiquitin-protein ligase XERICO 
 cit-r.1   102616511   hypothetical protein 
 cit-r.1   102607114   probable E3 ubiquitin-protein ligase XERICO 
 gma-u.5   100811790   probable E3 ubiquitin-protein ligase XERICO 
 gma-u.5   100786803   E3 ubiquitin-protein ligase RHA1B-like 
 gma-u.5   100527069   RING/U-box superfamily protein 
 vvi-u.5   100852957   probable E3 ubiquitin-protein ligase XERICO 
 vvi-u.5   100244155   probable E3 ubiquitin-protein ligase XERICO 
 ppo-u.5   7456018   probable E3 ubiquitin-protein ligase XERICO 
 mtr-u.5   11443039   probable E3 ubiquitin-protein ligase XERICO 
 mtr-u.5   11408932   probable E3 ubiquitin-protein ligase XERICO 
 sly-u.5   101248391   probable E3 ubiquitin-protein ligase XERICO 
 sly-u.5   101266432   probable E3 ubiquitin-protein ligase XERICO 
 sly-u.5   101257337   probable E3 ubiquitin-protein ligase XERICO 
 sot-r.1   102579789   probable E3 ubiquitin-protein ligase XERICO 
 sot-r.1   102603743   probable E3 ubiquitin-protein ligase XERICO 
 nta-r.1   107814320   putative E3 ubiquitin-protein ligase XERICO 
 nta-r.1   107803324   putative E3 ubiquitin-protein ligase XERICO 
 nta-r.1   107789516   putative E3 ubiquitin-protein ligase XERICO 
 osa-u.5   4345912   probable E3 ubiquitin-protein ligase XERICO 
 osa-u.5   4347374   probable E3 ubiquitin-protein ligase XERICO 
 zma-u.5   100281379   uncharacterized LOC100281379 
 zma-u.5   100284490   uncharacterized LOC100284490 
 zma-u.5   100285376   RING-H2 finger protein 
 tae-r.2   123121838   probable E3 ubiquitin-protein ligase XERICO 
 tae-r.2   123112312   probable E3 ubiquitin-protein ligase XERICO 
 tae-r.2   123104085   probable E3 ubiquitin-protein ligase XERICO 
 hvu-r.1   123399170   probable E3 ubiquitin-protein ligase XERICO 
 sbi-r.1   8063756   probable E3 ubiquitin-protein ligase XERICO 
 sbi-r.1   8055355   probable E3 ubiquitin-protein ligase XERICO 
 bdi-r.1   100840263   probable E3 ubiquitin-protein ligase XERICO 
 bdi-r.1   100821215   probable E3 ubiquitin-protein ligase XERICO 
 cre-r.1   CHLRE_09g392650v5   uncharacterized protein 
 cre-r.1   CHLRE_01g009101v5   uncharacterized protein 

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Top 50 coexpressed genes to 107951960 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107951960 (ghi-r.1 coexpression data)

CoexMap"107951960"


ghiLOC107951960 | Entrez gene ID : 107951960    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 2 3 2 1 2 3 2 3 2 3 3 1 2 2 2
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016742645.1 [sequence] [blastp]
XP_040972897.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  cyto 1,  extr 1  (predict for XP_016742645.1)
chlo 6,  cyto 1,  extr 1  (predict for XP_040972897.1)
Subcellular
localization
TargetP
chlo 3  (predict for XP_016742645.1)
chlo 3  (predict for XP_040972897.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107951960
ghi-r.1
for
107916913
ghi-r.1
for
107921230
ghi-r.1
for
107923011
ath-u.5
for
XERICO
ath-u.5
for
AT1G24580
bra-r.6
for
117125660
bra-r.6
for
103828541
bra-r.6
for
103860295
bna-r.1
for
106361820
bna-r.1
for
106366671
bna-r.1
for
106395035
cit-r.1
for
102616511
cit-r.1
for
102607114
gma-u.5
for
100811790
gma-u.5
for
100786803
gma-u.5
for
100527069
vvi-u.5
for
100852957
vvi-u.5
for
100244155
ppo-u.5
for
7456018
mtr-u.5
for
11443039
mtr-u.5
for
11408932
sly-u.5
for
101248391
sly-u.5
for
101266432
sly-u.5
for
101257337
sot-r.1
for
102579789
sot-r.1
for
102603743
nta-r.1
for
107814320
nta-r.1
for
107803324
nta-r.1
for
107789516
osa-u.5
for
4345912
osa-u.5
for
4347374
zma-u.5
for
100281379
zma-u.5
for
100284490
zma-u.5
for
100285376
tae-r.2
for
123121838
tae-r.2
for
123112312
tae-r.2
for
123104085
hvu-r.1
for
123399170
sbi-r.1
for
8063756
sbi-r.1
for
8055355
bdi-r.1
for
100840263
bdi-r.1
for
100821215
cre-r.1
for
CHLRE_09g392650v5
cre-r.1
for
CHLRE_01g009101v5


Ortholog ID: 2255
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit cit gma gma gma vvi vvi ppo mtr mtr sly sly sly sot sot nta nta osa osa zma zma zma tae tae tae hvu sbi sbi bdi bdi cre cre
Symbol LOC107954993 LOC107912470 LOC107954699 XERICO AT1G24580 LOC117125660 LOC103828541 LOC103860295 LOC106395035 LOC106360121 LOC106361762 LOC102616511 LOC102607114 LOC100811790 LOC100786803 LOC100306440 LOC100852957 LOC100244155 LOC7456018 LOC11443039 LOC11408932 LOC101248391 LOC101266432 LOC101257337 LOC102579789 LOC102603743 LOC107814320 LOC142178125 LOC4345912 LOC4347374 LOC100281379 LOC100284490 LOC100285376 LOC123121838 LOC123112312 LOC123104085 LOC123399170 LOC8063756 LOC8055355 LOC100840263 LOC100821215 CHLRE_09g392650v5 CHLRE_01g009101v5
Function* probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO RING/U-box superfamily protein RING/U-box superfamily protein probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO hypothetical protein probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO E3 ubiquitin-protein ligase RHA1B-like PHD transcription factor probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO putative E3 ubiquitin-protein ligase XERICO putative E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO uncharacterized LOC100281379 uncharacterized LOC100284490 RING-H2 finger protein probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO probable E3 ubiquitin-protein ligase XERICO uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00010 Glycolysis / Gluconeogenesis 2
ghi00030 Pentose phosphate pathway 2
ghi00051 Fructose and mannose metabolism 2
ghi00710 Carbon fixation by Calvin cycle 2
ghi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00904 Diterpenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00052 Galactose metabolism 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma03083 Polycomb repressive complex 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 5
vvi04016 MAPK signaling pathway - plant 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
ppo04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04712 Circadian rhythm - plant 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04142 Lysosome 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 4
nta04075 Plant hormone signal transduction 4
nta00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 5
osa04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 8
zma04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 6
tae04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04016 MAPK signaling pathway - plant 4
sbi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04712 Circadian rhythm - plant 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954993 107912470 107954699 814962 2745762 117125660 103828541 103860295 106395035 106360121 106361762 102616511 102607114 100811790 100786803 100306440 100852957 100244155 7456018 11443039 11408932 101248391 101266432 101257337 102579789 102603743 107814320 142178125 4345912 4347374 100281379 100284490 100285376 123121838 123112312 123104085 123399170 8063756 8055355 100840263 100821215 5720100 5725816
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