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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107952241   uncharacterized LOC107952241 
 ath-u.5   AT3G58030   RING/U-box superfamily protein 
 gma-u.5   100811099   uncharacterized LOC100811099 
 gma-u.5   100782225   uncharacterized LOC100782225 
 vvi-u.5   100260713   uncharacterized LOC100260713 
 ppo-u.5   7488030   uncharacterized LOC7488030 
 ppo-u.5   7479521   uncharacterized LOC7479521 
 mtr-u.5   11418492   uncharacterized LOC11418492 
 sly-u.5   101255151   uncharacterized LOC101255151 

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Top 50 coexpressed genes to 107952241 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107952241 (ghi-r.1 coexpression data)

CoexMap"107952241"


ghiLOC107952241 | Entrez gene ID : 107952241    
Species ghi ath gma vvi ppo mtr sly bdi hvu bra cit bna sbi osa sot nta cre tae zma
Paralog 1 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (782 genes)  IEA  
GO CC
GO:0005783 [list] [network] endoplasmic reticulum  (1428 genes)  IEA  
GO MF
GO:0044390 [list] [network] ubiquitin-like protein conjugating enzyme binding  (82 genes)  IEA  
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0046872 [list] [network] metal ion binding  (4664 genes)  IEA  
Protein XP_016743003.1 [sequence] [blastp]
XP_040952993.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 9,  cyto 1,  extr 1  (predict for XP_016743003.1)
nucl 9,  cyto 1,  extr 1  (predict for XP_040952993.1)
Subcellular
localization
TargetP
other 7,  chlo 4  (predict for XP_016743003.1)
other 7,  chlo 4  (predict for XP_040952993.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107952241
ath-u.5
for
AT3G58030
gma-u.5
for
100811099
gma-u.5
for
100782225
vvi-u.5
for
100260713
ppo-u.5
for
7488030
ppo-u.5
for
7479521
mtr-u.5
for
11418492
sly-u.5
for
101255151


Ortholog ID: 8990
Species ghi ghi ath bra bra bna bna cit gma gma vvi ppo ppo mtr sly sot nta nta
Symbol LOC107924237 LOC107891249 AT3G58030 LOC103830134 LOC103841700 LOC106368263 LOC125595157 LOC102622440 LOC100811099 LOC100782225 LOC100260713 LOC7488030 LOC7479521 LOC11418492 LOC101255151 LOC102600219 LOC107830390 LOC107805356
Function* uncharacterized LOC107924237 breast cancer type 1 susceptibility protein homolog RING/U-box superfamily protein uncharacterized LOC103830134 uncharacterized LOC103841700 uncharacterized LOC106368263 uncharacterized LOC125595157 hypothetical protein uncharacterized LOC100811099 uncharacterized LOC100782225 uncharacterized LOC100260713 uncharacterized LOC7488030 uncharacterized LOC7479521 uncharacterized LOC11418492 uncharacterized LOC101255151 uncharacterized LOC102600219 uncharacterized LOC107830390 uncharacterized LOC107805356
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04141 Protein processing in endoplasmic reticulum 2
ghi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00510 N-Glycan biosynthesis 2
ghi00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00562 Inositol phosphate metabolism 2
bra04070 Phosphatidylinositol signaling system 2
bra03083 Polycomb repressive complex 2
bra03250 Viral life cycle - HIV-1 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04141 Protein processing in endoplasmic reticulum 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
cit03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 3
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00600 Sphingolipid metabolism 2
sot04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924237 107891249 824972 103830134 103841700 106368263 125595157 102622440 100811099 100782225 100260713 7488030 7479521 11418492 101255151 102600219 107830390 107805356
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