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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107952962   auxin response factor 11 
 ath-u.5   ARF11   auxin response factor 11 
 ath-u.5   ARF18   auxin response factor 18 
 ath-u.5   ARF9   auxin response factor 9 
 gma-u.5   100790981   auxin response factor 18 
 gma-u.5   100780060   auxin response factor 9 
 gma-u.5   100799088   auxin response factor 9 
 vvi-u.5   100265555   auxin response factor 18 
 vvi-u.5   100247833   auxin response factor 9 
 ppo-u.5   18105244   auxin response factor 18 
 ppo-u.5   7467068   auxin response factor 9 
 ppo-u.5   7497860   auxin response factor 9 
 mtr-u.5   11412612   auxin response factor 9 
 mtr-u.5   25498520   auxin response factor 9 
 mtr-u.5   25500666   auxin response factor 18 
 sly-u.5   ARF9   auxin response factor 9 
 sly-u.5   ARF12   auxin response factor 12 
 sly-u.5   ARF18   auxin response factor 18 

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Top 50 coexpressed genes to 107952962 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107952962 (ghi-r.1 coexpression data)

CoexMap"107952962"


ghiLOC107952962 | Entrez gene ID : 107952962    
Species ghi ath gma vvi ppo mtr sly hvu zma bna cit bra osa sbi bdi nta tae cre sot
Paralog 1 3 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04075 [list] [network] Plant hormone signal transduction (1215 genes)
GO BP
GO:0009725 [list] [network] response to hormone  (1008 genes)  IEA  
GO:0006355 [list] [network] regulation of DNA-templated transcription  (4318 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0003677 [list] [network] DNA binding  (4831 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040973858.1 [sequence] [blastp]
XP_040973859.1 [sequence] [blastp]
XP_040973860.1 [sequence] [blastp]
XP_040973861.1 [sequence] [blastp]
XP_040973862.1 [sequence] [blastp]
XP_040973863.1 [sequence] [blastp]
XP_040973864.1 [sequence] [blastp]
XP_040973865.1 [sequence] [blastp]
XP_040973866.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973858.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973859.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973860.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973861.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973862.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973863.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973864.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973865.1)
nucl 8,  chlo 1,  cyto 1,  cysk 1  (predict for XP_040973866.1)
Subcellular
localization
TargetP
other 6  (predict for XP_040973858.1)
other 6  (predict for XP_040973859.1)
other 6  (predict for XP_040973860.1)
other 6  (predict for XP_040973861.1)
other 6  (predict for XP_040973862.1)
other 6  (predict for XP_040973863.1)
other 6  (predict for XP_040973864.1)
other 6  (predict for XP_040973865.1)
other 6  (predict for XP_040973866.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107952962
ath-u.5
for
ARF11
ath-u.5
for
ARF18
ath-u.5
for
ARF9
gma-u.5
for
100790981
gma-u.5
for
100780060
gma-u.5
for
100799088
vvi-u.5
for
100265555
vvi-u.5
for
100247833
ppo-u.5
for
18105244
ppo-u.5
for
7467068
ppo-u.5
for
7497860
mtr-u.5
for
11412612
mtr-u.5
for
25498520
mtr-u.5
for
25500666
sly-u.5
for
ARF9
sly-u.5
for
ARF12
sly-u.5
for
ARF18


Ortholog ID: 2715
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta
Symbol LOC107924260 LOC107945001 ARF18 ARF11 ARF18-2 ARF11 LOC106414365 LOC106414111 LOC102627122 LOC102625615 LOC100820503 LOC100780060 LOC100247833 LOC100265555 LOC7467068 LOC7497860 LOC11412612 LOC25498520 ARF18 ARF9 LOC102582092 LOC102605272 LOC107771982 LOC107799406
Function* auxin response factor 9 auxin response factor 18 auxin response factor 18 auxin response factor 11 auxin response factor 18 auxin response factor 11 auxin response factor 11 auxin response factor 9 auxin response factor 18 auxin response factor 9 auxin response factor 18 auxin response factor 9 auxin response factor 9 auxin response factor 18 auxin response factor 9 auxin response factor 9 auxin response factor 9 auxin response factor 9 auxin response factor 18 auxin response factor 9 auxin response factor 9-like auxin response factor 9 auxin response factor 18 auxin response factor 9
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 4
ghi00904 Diterpenoid biosynthesis 2
ghi00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 4
bra04814 Motor proteins 2
bra03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 8
bna04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00062 Fatty acid elongation 2
cit01040 Biosynthesis of unsaturated fatty acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 5
ppo03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 6
mtr00380 Tryptophan metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot00260 Glycine, serine and threonine metabolism 3
sot00470 D-Amino acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04075 Plant hormone signal transduction 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107924260 107945001 825356 819264 103862810 103866459 106414365 106414111 102627122 102625615 100820503 100780060 100247833 100265555 7467068 7497860 11412612 25498520 101255336 100736445 102582092 102605272 107771982 107799406
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