ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107953445	uncharacterized LOC107953445
ghi-r.1	107916894	uncharacterized LOC107916894
ghi-r.1	107912716	uncharacterized LOC107912716
ghi-r.1	121232106	uncharacterized LOC121232106
ath-u.5	AT3G02500	mental retardation GTPase activating protein
ath-u.5	AT5G16030	mental retardation GTPase activating protein
bra-r.6	103846363	myelin transcription factor 1
bra-r.6	103851020	uncharacterized LOC103851020
bra-r.6	103856178	uncharacterized LOC103856178
bna-r.1	106354470	uncharacterized LOC106354470
bna-r.1	111204309	uncharacterized LOC111204309
bna-r.1	106401947	mental retardation GTPase activating protein homolog 4-like
cit-r.1	102621023	hypothetical protein
gma-u.5	100804073	uncharacterized LOC100804073
gma-u.5	100786993	uncharacterized LOC100786993
gma-u.5	100780261	uncharacterized LOC100780261
vvi-u.5	100248073	uncharacterized LOC100248073
ppo-u.5	18107397	uncharacterized LOC18107397
ppo-u.5	7468365	uncharacterized LOC7468365
mtr-u.5	25497648	uncharacterized LOC25497648
mtr-u.5	25495609	uncharacterized LOC25495609
sly-u.5	101255558	uncharacterized LOC101255558
sly-u.5	101260301	uncharacterized LOC101260301
sot-r.1	102581404	uncharacterized LOC102581404
sot-r.1	102579386	uncharacterized LOC102579386
nta-r.1	107768391	uncharacterized LOC107768391
nta-r.1	107820732	uncharacterized LOC107820732
nta-r.1	107825040	uncharacterized LOC107825040

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016744242.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, cyto_nucl 4, chlo 1

(predict for XP_016744242.1)

Subcellular
localization
TargetP

chlo 8, other 4

(predict for XP_016744242.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107953445	ghi-r.1 for 107916894	ghi-r.1 for 107912716	ghi-r.1 for 121232106	ath-u.5 for AT3G02500	ath-u.5 for AT5G16030	bra-r.6 for 103846363	bra-r.6 for 103851020	bra-r.6 for 103856178	bna-r.1 for 106354470	bna-r.1 for 111204309	bna-r.1 for 106401947	cit-r.1 for 102621023	gma-u.5 for 100804073	gma-u.5 for 100786993	gma-u.5 for 100780261	vvi-u.5 for 100248073	ppo-u.5 for 18107397	ppo-u.5 for 7468365	mtr-u.5 for 25497648	mtr-u.5 for 25495609	sly-u.5 for 101255558	sly-u.5 for 101260301	sot-r.1 for 102581404	sot-r.1 for 102579386	nta-r.1 for 107768391	nta-r.1 for 107820732	nta-r.1 for 107825040

Ortholog

Ortholog ID: 6559

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

Symbol

Function^*

uncharacterized LOC107953445

uncharacterized LOC107916894

uncharacterized LOC107912716

mental retardation GTPase activating protein

myelin transcription factor 1

uncharacterized LOC103851020

uncharacterized LOC103856178

uncharacterized LOC106354470

hybrid signal transduction histidine kinase E-like

histone-lysine N-methyltransferase, H3 lysine-79 specific-like

hypothetical protein

uncharacterized LOC100786993

uncharacterized LOC100780261

uncharacterized LOC100820045

uncharacterized LOC100248073

uncharacterized LOC18107397

uncharacterized LOC7468365

uncharacterized LOC25497648

uncharacterized LOC25495609

uncharacterized LOC101255558

uncharacterized LOC101260301

uncharacterized LOC102581404

uncharacterized LOC102579386

uncharacterized LOC107768391

uncharacterized LOC107820732

uncharacterized LOC107825040

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00511	Other glycan degradation	2
bna00600	Sphingolipid metabolism	2
bna04382	Cornified envelope formation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00860	Porphyrin metabolism	3
gma00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr02010	ABC transporters	3
mtr04981	Folate transport and metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04814	Motor proteins	2
nta04145	Phagosome	2
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04144	Endocytosis	3
nta04145	Phagosome	2
nta04148	Efferocytosis	2
nta04517	IgSF CAM signaling	2
nta04518	Integrin signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00511	Other glycan degradation	3
nta00513	Various types of N-glycan biosynthesis	2
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta00531	Glycosaminoglycan degradation	2
nta00600	Sphingolipid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107953445

107916894

107912716

821065

831460

103846363

103851020

103856178

106354470

106433138

106424724

102621023

100786993

100780261

100820045

100248073

18107397

7468365

25497648

25495609

101255558

101260301

102581404

102579386

107768391

107820732

107825040

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107953445 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107953445 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	sbi	osa	tae	hvu	zma	cre	bdi
Paralog	4	2	3	3	1	3	1	2	2	2	2	3	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107953445 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107953445 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**