ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107953446	uncharacterized LOC107953446
ghi-r.1	107943181	uncharacterized LOC107943181
ghi-r.1	107934237	uncharacterized LOC107934237
ghi-r.1	107930950	uncharacterized LOC107930950
ath-u.5	AT5G38690	Zinc-finger domain of monoamine-oxidase A repressor R1 protein
ath-u.5	AT1G67780	Zinc-finger domain of monoamine-oxidase A repressor R1 protein
bra-r.6	103831160	uncharacterized LOC103831160
bna-r.1	106353929	uncharacterized LOC106353929
cit-r.1	102619522	uncharacterized LOC102619522
gma-u.5	100820577	uncharacterized LOC100820577
gma-u.5	100780800	uncharacterized LOC100780800
vvi-u.5	100265150	uncharacterized LOC100265150
vvi-u.5	100242396	uncharacterized LOC100242396
ppo-u.5	7489124	uncharacterized LOC7489124
ppo-u.5	7465401	uncharacterized LOC7465401
mtr-u.5	25495611	uncharacterized LOC25495611
mtr-u.5	25479750	uncharacterized LOC25479750
sly-u.5	101259506	uncharacterized LOC101259506
sot-r.1	102580062	uncharacterized LOC102580062
nta-r.1	107764996	uncharacterized LOC107764996
nta-r.1	107805275	uncharacterized LOC107805275
osa-u.5	4329136	uncharacterized LOC4329136
osa-u.5	4338347	uncharacterized LOC4338347
zma-u.5	100501915	Zinc-finger domain of monoamine-oxidase A repressor R1 protein
tae-r.2	123132407	uncharacterized LOC123132407
tae-r.2	123077196	uncharacterized LOC123077196
tae-r.2	123068683	uncharacterized LOC123068683
hvu-r.1	123442727	uncharacterized LOC123442727
hvu-r.1	123407328	uncharacterized LOC123407328
hvu-r.1	123401451	uncharacterized LOC123401451
sbi-r.1	8077788	uncharacterized LOC8077788
bdi-r.1	100822445	uncharacterized LOC100822445
bdi-r.1	100838188	uncharacterized LOC100838188
bdi-r.1	100845197	uncharacterized LOC100845197

Top 50 coexpressed genes to 107953446 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107953446 (ghi-r.1 coexpression data)

CoexMap"107953446"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO:0006355 [list] [network] regulation of DNA-templated transcription

(4318 genes)

IEA

GO CC

GO:0005634 [list] [network] nucleus

(7681 genes)

IEA

GO MF

Protein

XP_040953307.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 3, cysk 1, cyto_pero 1, cyto_E.R. 1, cyto_plas 1

(predict for XP_040953307.1)

Subcellular
localization
TargetP

other 5, chlo 5

(predict for XP_040953307.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107953446	ghi-r.1 for 107943181	ghi-r.1 for 107934237	ghi-r.1 for 107930950	ath-u.5 for AT5G38690	ath-u.5 for AT1G67780	bra-r.6 for 103831160	bna-r.1 for 106353929	cit-r.1 for 102619522	gma-u.5 for 100820577	gma-u.5 for 100780800	vvi-u.5 for 100265150	vvi-u.5 for 100242396	ppo-u.5 for 7489124	ppo-u.5 for 7465401	mtr-u.5 for 25495611	mtr-u.5 for 25479750	sly-u.5 for 101259506	sot-r.1 for 102580062	nta-r.1 for 107764996	nta-r.1 for 107805275	osa-u.5 for 4329136	osa-u.5 for 4338347	zma-u.5 for 100501915	tae-r.2 for 123132407	tae-r.2 for 123077196	tae-r.2 for 123068683	hvu-r.1 for 123442727	hvu-r.1 for 123407328	hvu-r.1 for 123401451	sbi-r.1 for 8077788	bdi-r.1 for 100822445	bdi-r.1 for 100838188	bdi-r.1 for 100845197

Ortholog

Ortholog ID: 2504

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107953446

uncharacterized LOC107943181

uncharacterized LOC107934237

Zinc-finger domain of monoamine-oxidase A repressor R1 protein

uncharacterized LOC103831160

uncharacterized LOC106353929

uncharacterized LOC102619522

uncharacterized LOC100820577

uncharacterized LOC100780800

uncharacterized LOC100265150

uncharacterized LOC7489124

uncharacterized LOC7465401

uncharacterized LOC25495611

uncharacterized LOC25479750

uncharacterized LOC101259506

uncharacterized LOC102580062

uncharacterized LOC107764996

uncharacterized LOC107805275

uncharacterized LOC4329136

uncharacterized LOC4338347

Zinc-finger domain of monoamine-oxidase A repressor R1 protein

uncharacterized LOC123068683

uncharacterized LOC123143983

uncharacterized LOC123442727

uncharacterized LOC123407328

uncharacterized LOC123401451

uncharacterized LOC8077788

uncharacterized LOC100838188

uncharacterized LOC100845197

uncharacterized LOC100843373

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	6
ghi01232	Nucleotide metabolism	6
ghi00230	Purine metabolism	4
ghi00480	Glutathione metabolism	4
ghi03440	Homologous recombination	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03030	DNA replication	8
ghi00240	Pyrimidine metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00240	Pyrimidine metabolism	5
ghi01232	Nucleotide metabolism	5
ghi00230	Purine metabolism	4
ghi00480	Glutathione metabolism	4
ghi03440	Homologous recombination	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03030	DNA replication	5
ath03440	Homologous recombination	5
ath03420	Nucleotide excision repair	4
ath03430	Mismatch repair	4
ath03460	Fanconi anemia pathway	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03030	DNA replication	5
bra03420	Nucleotide excision repair	3
bra03430	Mismatch repair	3
bra03440	Homologous recombination	3
bra03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03440	Homologous recombination	4
bna03460	Fanconi anemia pathway	4
bna03030	DNA replication	2
bna03430	Mismatch repair	2
bna00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00860	Porphyrin metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	4
gma00270	Cysteine and methionine metabolism	3
gma03420	Nucleotide excision repair	2
gma03430	Mismatch repair	2
gma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03030	DNA replication	5
gma00240	Pyrimidine metabolism	3
gma01232	Nucleotide metabolism	3
gma03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03030	DNA replication	8
ppo03440	Homologous recombination	3
ppo03410	Base excision repair	2
ppo03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03030	DNA replication	10
mtr03420	Nucleotide excision repair	3
mtr03430	Mismatch repair	2
mtr03440	Homologous recombination	2
mtr00510	N-Glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03030	DNA replication	4
sot03440	Homologous recombination	2
sot03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	10
nta03420	Nucleotide excision repair	3
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03030	DNA replication	8
nta03420	Nucleotide excision repair	3
nta03410	Base excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	3
zma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03030	DNA replication	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03083	Polycomb repressive complex	6
tae00514	Other types of O-glycan biosynthesis	3
tae00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01250	Biosynthesis of nucleotide sugars	3
hvu00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03030	DNA replication	6
bdi03440	Homologous recombination	3
bdi04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

107953446

107943181

107934237

833859

843103

103831160

106353929

102619522

100820577

100780800

100265150

7489124

7465401

25495611

25479750

101259506

102580062

107764996

107805275

4329136

4338347

100501915

123068683

123143983

123442727

123407328

123401451

8077788

100838188

100845197

100843373

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	1	1	2	2	2	2	1	1	2	2	1	3	3	1	3	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107953446 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107953446 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**