Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107953453   F-box/kelch-repeat protein At1g74510 
 ghi-r.1   121215342   F-box/kelch-repeat protein At5g60570 
 ghi-r.1   107938680   F-box/kelch-repeat protein At5g60570 
 ghi-r.1   107934229   F-box/kelch-repeat protein At1g74510 
 ath-u.5   AT2G02870   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5   AT3G27150   Galactose oxidase/kelch repeat superfamily protein 
 ath-u.5   AT5G60570   Galactose oxidase/kelch repeat superfamily protein 
 bra-r.6   103831925   F-box/kelch-repeat protein At1g74510 
 bra-r.6   103853972   F-box/kelch-repeat protein SKIP11 
 bra-r.6   103835621   F-box/kelch-repeat protein At1g26930 
 bna-r.1   106445051   F-box/kelch-repeat protein At1g26930-like 
 cit-r.1   102624109   F-box/kelch-repeat protein At5g60570 
 cit-r.1   102625928   F-box/kelch-repeat protein SKIP11 
 gma-u.5   100818865   F-box/kelch-repeat protein At1g26930 
 gma-u.5   100820005   BTB domain and kelch-repeat-containing protein 
 vvi-u.5   100243204   F-box/kelch-repeat protein At1g74510 
 vvi-u.5   100267013   F-box/kelch-repeat protein At3g27150 
 vvi-u.5   100249995   F-box/kelch-repeat protein SKIP11 
 ppo-u.5   7491076   F-box/kelch-repeat protein At5g60570 
 ppo-u.5   18107228   F-box/kelch-repeat protein At3g27150 
 ppo-u.5   7493898   F-box/kelch-repeat protein At5g60570 
 mtr-u.5   25495724   F-box/kelch-repeat protein At3g27150 
 mtr-u.5   11412774   F-box/kelch-repeat protein At1g26930 
 sly-u.5   101249448   F-box/kelch-repeat protein At1g74510 
 sly-u.5   101246939   F-box/kelch-repeat protein At3g27150-like 
 sly-u.5   101246126   F-box/kelch-repeat protein SKIP11 
 sot-r.1   102594271   F-box/kelch-repeat protein At3g27150-like 
 sot-r.1   102591193   F-box/kelch-repeat protein SKIP11 
 nta-r.1   107772441   F-box/kelch-repeat protein SKIP11-like 
 nta-r.1   107803303   F-box/kelch-repeat protein SKIP11-like 
 osa-u.5   4330727   F-box/kelch-repeat protein At1g74510 
 osa-u.5   9267632   F-box/kelch-repeat protein At5g60570-like 
 osa-u.5   4331777   F-box/kelch-repeat protein At1g74510 
 zma-u.5   100383230   uncharacterized LOC100383230 
 zma-u.5   100382458   F-box/kelch-repeat protein SKIP11 
 zma-u.5   103652655   vesicle-fusing ATPase 
 tae-r.2   123046736   F-box/kelch-repeat protein At5g60570 
 tae-r.2   123088606   disease resistance protein RGA5 
 hvu-r.1   123449568   F-box/kelch-repeat protein At1g74510-like 
 hvu-r.1   123427808   F-box/kelch-repeat protein At5g60570-like 
 hvu-r.1   123397631   F-box/kelch-repeat protein At1g26930-like 
 sbi-r.1   110429777   F-box/kelch-repeat protein At1g74510-like 
 sbi-r.1   8066690   F-box/kelch-repeat protein At1g26930 
 sbi-r.1   8066794   F-box/kelch-repeat protein At5g60570 
 bdi-r.1   100823072   F-box/kelch-repeat protein SKIP11 
 bdi-r.1   100832557   F-box/kelch-repeat protein At1g74510 
 cre-r.1   CHLRE_09g395450v5   uncharacterized protein 

close


Top 50 coexpressed genes to 107953453 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 107953453 (ghi-r.1 coexpression data)

CoexMap"107953453"


ghiLOC107953453 | Entrez gene ID : 107953453    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 3 3 1 2 2 3 3 2 3 2 2 3 3 2 3 3 2 1
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016744251.2 [sequence] [blastp]
XP_016744252.2 [sequence] [blastp]
XP_016744254.2 [sequence] [blastp]
XP_040953297.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016744251.2)
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016744252.2)
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_016744254.2)
cyto 7,  nucl 1,  extr 1,  pero 1,  cysk_nucl 1,  nucl_plas 1  (predict for XP_040953297.1)
Subcellular
localization
TargetP
other 8  (predict for XP_016744251.2)
other 8  (predict for XP_016744252.2)
other 8  (predict for XP_016744254.2)
other 8  (predict for XP_040953297.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107953453
ghi-r.1
for
121215342
ghi-r.1
for
107938680
ghi-r.1
for
107934229
ath-u.5
for
AT2G02870
ath-u.5
for
AT3G27150
ath-u.5
for
AT5G60570
bra-r.6
for
103831925
bra-r.6
for
103853972
bra-r.6
for
103835621
bna-r.1
for
106445051
cit-r.1
for
102624109
cit-r.1
for
102625928
gma-u.5
for
100818865
gma-u.5
for
100820005
vvi-u.5
for
100243204
vvi-u.5
for
100267013
vvi-u.5
for
100249995
ppo-u.5
for
7491076
ppo-u.5
for
18107228
ppo-u.5
for
7493898
mtr-u.5
for
25495724
mtr-u.5
for
11412774
sly-u.5
for
101249448
sly-u.5
for
101246939
sly-u.5
for
101246126
sot-r.1
for
102594271
sot-r.1
for
102591193
nta-r.1
for
107772441
nta-r.1
for
107803303
osa-u.5
for
4330727
osa-u.5
for
9267632
osa-u.5
for
4331777
zma-u.5
for
100383230
zma-u.5
for
100382458
zma-u.5
for
103652655
tae-r.2
for
123046736
tae-r.2
for
123088606
hvu-r.1
for
123449568
hvu-r.1
for
123427808
hvu-r.1
for
123397631
sbi-r.1
for
110429777
sbi-r.1
for
8066690
sbi-r.1
for
8066794
bdi-r.1
for
100823072
bdi-r.1
for
100832557
cre-r.1
for
CHLRE_09g395450v5


Ortholog ID: 273
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma vvi vvi vvi ppo ppo ppo mtr mtr sly sly sot sot sot nta nta osa osa zma zma zma tae tae hvu hvu hvu sbi sbi sbi bdi bdi cre
Symbol LOC107934229 LOC107919874 LOC107899430 AT3G27150 AT5G60570 AT1G74510 LOC103831925 LOC103845472 LOC103852911 LOC106371610 LOC106369331 LOC106438189 LOC102624109 LOC102625928 LOC102628964 LOC100813839 LOC100243204 LOC100267013 LOC100244336 LOC7491076 LOC18107228 LOC7493898 LOC11412774 LOC25502729 LOC101249448 LOC101246126 LOC102594271 LOC102591193 LOC102585689 LOC107815441 LOC107832339 LOC4331777 LOC9270188 LOC103652655 LOC100274214 LOC100283956 LOC123145484 LOC123128370 LOC123449568 LOC123427808 LOC123401423 LOC110429777 LOC8066690 LOC110434702 LOC100823072 LOC100832557 CHLRE_09g395450v5
Function* F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At1g26930 F-box/kelch-repeat protein At5g60570 Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein Galactose oxidase/kelch repeat superfamily protein F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein At3g27150 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At3g27150 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein At3g27150 F-box/kelch-repeat protein At5g60570 F-box/kelch-repeat protein At1g26930 F-box/kelch-repeat protein At1g26930 F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein At3g27150-like F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein At3g27150-like F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At5g60570 vesicle-fusing ATPase F-box/kelch-repeat protein uncharacterized LOC100283956 F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At1g74510 F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein At5g60570-like F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein At1g26930 F-box/kelch-repeat protein At1g74510-like F-box/kelch-repeat protein SKIP11 F-box/kelch-repeat protein At1g74510 uncharacterized protein
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00520 Amino sugar and nucleotide sugar metabolism 3
ghi01250 Biosynthesis of nucleotide sugars 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03015 mRNA surveillance pathway 2
ath00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00620 Pyruvate metabolism 5
bra01200 Carbon metabolism 5
bra00061 Fatty acid biosynthesis 3
bra00640 Propanoate metabolism 3
bra01212 Fatty acid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00960 Tropane, piperidine and pyridine alkaloid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04146 Peroxisome 3
gma04016 MAPK signaling pathway - plant 3
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00190 Oxidative phosphorylation 4
ppo00020 Citrate cycle (TCA cycle) 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 2
ppo00520 Amino sugar and nucleotide sugar metabolism 2
ppo04626 Plant-pathogen interaction 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04075 Plant hormone signal transduction 2
mtr00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04075 Plant hormone signal transduction 3
sot00908 Zeatin biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00940 Phenylpropanoid biosynthesis 2
nta00270 Cysteine and methionine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00010 Glycolysis / Gluconeogenesis 2
zma00030 Pentose phosphate pathway 2
zma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 4
hvu04144 Endocytosis 3
hvu01200 Carbon metabolism 3
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00400 Phenylalanine, tyrosine and tryptophan biosynthesis 3
hvu01230 Biosynthesis of amino acids 3
hvu04146 Peroxisome 2
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 3
bdi04142 Lysosome 2
bdi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00520 Amino sugar and nucleotide sugar metabolism 3
bdi01250 Biosynthesis of nucleotide sugars 3
bdi00541 Biosynthesis of various nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107934229 107919874 107899430 822334 836178 843792 103831925 103845472 103852911 106371610 106369331 106438189 102624109 102625928 102628964 100813839 100243204 100267013 100244336 7491076 18107228 7493898 11412774 25502729 101249448 101246126 102594271 102591193 102585689 107815441 107832339 4331777 9270188 103652655 100274214 100283956 123145484 123128370 123449568 123427808 123401423 110429777 8066690 110434702 100823072 100832557 5720150
The preparation time of this page was 0.2 [sec].