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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107953684   BRAP2 RING ZnF UBP domain-containing protein 1 
 ath-u.5   BRIZ2   zinc finger (C3HC4-type RING finger) family protein 
 ath-u.5   BRIZ1   zinc finger (ubiquitin-hydrolase) domain-containing protein 
 gma-u.5   100794688   BRAP2 RING ZnF UBP domain-containing protein 2 
 gma-u.5   100805696   BRAP2 RING ZnF UBP domain-containing protein 1 
 gma-u.5   100807397   BRAP2 RING ZnF UBP domain-containing protein 1 
 vvi-u.5   100242688   BRAP2 RING ZnF UBP domain-containing protein 2 
 vvi-u.5   100249232   BRAP2 RING ZnF UBP domain-containing protein 1 
 ppo-u.5   18099159   BRAP2 RING ZnF UBP domain-containing protein 2 
 ppo-u.5   7462582   BRAP2 RING ZnF UBP domain-containing protein 2 
 ppo-u.5   7459882   BRAP2 RING ZnF UBP domain-containing protein 1 
 mtr-u.5   11441671   BRAP2 RING ZnF UBP domain-containing protein 1 
 mtr-u.5   11427211   BRAP2 RING ZnF UBP domain-containing protein 2 
 sly-u.5   101244783   BRAP2 RING ZnF UBP domain-containing protein 1 
 sly-u.5   101253672   BRAP2 RING ZnF UBP domain-containing protein 2 
 osa-u.5   4337211   BRAP2 RING ZnF UBP domain-containing protein 1 
 osa-u.5   4328521   BRCA1-associated protein 
 zma-u.5   100282389   RING-type E3 ubiquitin transferase 
 zma-u.5   100191553   zinc finger (ubiquitin-hydrolase) domain-containing protein 

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Top 50 coexpressed genes to 107953684 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107953684 (ghi-r.1 coexpression data)

CoexMap"107953684"


ghiLOC107953684 | Entrez gene ID : 107953684    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 2 3 2 2 2 2 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0007265 [list] [network] Ras protein signal transduction  (4 genes)  IEA  
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (513 genes)  IEA  
GO:0008270 [list] [network] zinc ion binding  (1753 genes)  IEA  
Protein XP_016744557.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  cysk 1  (predict for XP_016744557.1)
Subcellular
localization
TargetP
other 6,  chlo 4  (predict for XP_016744557.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107953684
ath-u.5
for
BRIZ2
ath-u.5
for
BRIZ1
gma-u.5
for
100794688
gma-u.5
for
100805696
gma-u.5
for
100807397
vvi-u.5
for
100242688
vvi-u.5
for
100249232
ppo-u.5
for
18099159
ppo-u.5
for
7462582
ppo-u.5
for
7459882
mtr-u.5
for
11441671
mtr-u.5
for
11427211
sly-u.5
for
101244783
sly-u.5
for
101253672
osa-u.5
for
4337211
osa-u.5
for
4328521
zma-u.5
for
100282389
zma-u.5
for
100191553


Ortholog ID: 3430
Species ghi ghi ath ath bra bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107933187 LOC107953684 BRIZ1 BRIZ2 LOC103853241 LOC103873739 LOC111204424 LOC125603914 LOC102626727 LOC102616781 LOC100794688 LOC100805696 LOC100242688 LOC100249232 LOC7459882 LOC7462582 LOC11441671 LOC11427211 LOC101253672 LOC101244783 LOC102585885 LOC102582441 LOC107780984 LOC107788166 LOC4337211 LOC4328521 LOC100282389 LOC100191553 LOC123190791 LOC123136528 LOC123428156 LOC123402926 LOC8079413 LOC8068480 LOC100833841 LOC100836464 CHLRE_10g454400v5
Function* BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 1 zinc finger (ubiquitin-hydrolase) domain-containing protein zinc finger (C3HC4-type RING finger) family protein BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 2-like BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRCA1-associated protein BRCA1-associated protein BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 1 BRCA1-associated protein RING-type E3 ubiquitin transferase zinc finger (ubiquitin-hydrolase) domain-containing protein BRAP2 RING ZnF UBP domain-containing protein 1 BRAP2 RING ZnF UBP domain-containing protein 2 BRAP2 RING ZnF UBP domain-containing protein 1-like BRAP2 RING ZnF UBP domain-containing protein 2 BRCA1-associated protein RING finger protein ETP1 homolog BRCA1-associated protein BRCA1-associated protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00330 Arginine and proline metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04146 Peroxisome 2
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03022 Basal transcription factors 2
sot00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
osa03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03013 Nucleocytoplasmic transport 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03420 Nucleotide excision repair 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00071 Fatty acid degradation 4
bdi01212 Fatty acid metabolism 4
bdi04146 Peroxisome 4
bdi00410 beta-Alanine metabolism 2
bdi00592 alpha-Linolenic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107933187 107953684 818816 817141 103853241 103873739 111204424 125603914 102626727 102616781 100794688 100805696 100242688 100249232 7459882 7462582 11441671 11427211 101253672 101244783 102585885 102582441 107780984 107788166 4337211 4328521 100282389 100191553 123190791 123136528 123428156 123402926 8079413 8068480 100833841 100836464 5723911
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