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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107953829   60S ribosomal protein L37-3 
 ath-u.5   AT3G16080   Zinc-binding ribosomal protein family protein 
 ath-u.5   AT1G15250   Zinc-binding ribosomal protein family protein 
 ath-u.5   AT1G52300   Zinc-binding ribosomal protein family protein 
 gma-u.5   100306503   60S ribosomal protein L37 
 gma-u.5   100809899   60S ribosomal protein L37-3 
 gma-u.5   100527725   60S ribosomal protein L37-3 
 vvi-u.5   100247371   large ribosomal subunit protein eL37x 
 vvi-u.5   100253219   large ribosomal subunit protein eL37x 
 ppo-u.5   7458981   60S ribosomal protein L37-1 
 ppo-u.5   7470555   60S ribosomal protein L37-3 
 ppo-u.5   7495722   60S ribosomal protein L37-1 
 mtr-u.5   25480464   60S ribosomal protein L37-3 
 mtr-u.5   11435273   60S ribosomal protein L37-3 
 sly-u.5   101260522   large ribosomal subunit protein eL37x 
 sly-u.5   101248112   large ribosomal subunit protein eL37y 
 sly-u.5   RPL37   60S ribosomal protein L37 
 osa-u.5   4328048   large ribosomal subunit protein eL37z 
 osa-u.5   9267955   60S ribosomal protein L37-3 
 osa-u.5   4344579   large ribosomal subunit protein eL37z 
 zma-u.5   103157007   60S ribosomal protein L37-like 
 zma-u.5   103626516   60S ribosomal protein L37-like 
 zma-u.5   100284994   60S ribosomal protein L37-like 

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Top 50 coexpressed genes to 107953829 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107953829 (ghi-r.1 coexpression data)

CoexMap"107953829"


ghiLOC107953829 | Entrez gene ID : 107953829    
Species ghi ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae bna
Paralog 1 3 3 2 3 2 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03010 [list] [network] Ribosome (2429 genes)
GO BP
GO:0006412 [list] [network] translation  (1487 genes)  IEA  
GO CC
GO:0022625 [list] [network] cytosolic large ribosomal subunit  (467 genes)  IEA  
GO:0005840 [list] [network] ribosome  (1110 genes)  IEA  
GO MF
GO:0003735 [list] [network] structural constituent of ribosome  (1075 genes)  IEA  
GO:0003723 [list] [network] RNA binding  (3053 genes)  IEA  
Protein XP_016744739.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 4,  chlo 3,  nucl 2,  cyto_pero 2,  cyto_E.R. 2,  cyto_plas 2  (predict for XP_016744739.1)
Subcellular
localization
TargetP
chlo 6  (predict for XP_016744739.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107953829

.
ath-u.5
for
AT3G16080

.
ath-u.5
for
AT1G15250

.
ath-u.5
for
AT1G52300

.
gma-u.5
for
100306503

.
gma-u.5
for
100809899

.
gma-u.5
for
100527725

.
vvi-u.5
for
100247371

.
vvi-u.5
for
100253219

.
ppo-u.5
for
7458981

.
ppo-u.5
for
7470555

.
ppo-u.5
for
7495722

.
mtr-u.5
for
25480464

.
mtr-u.5
for
11435273

.
sly-u.5
for
101260522

.
sly-u.5
for
101248112

.
sly-u.5
for
RPL37

.
osa-u.5
for
4328048

.
osa-u.5
for
9267955

.
osa-u.5
for
4344579

.
zma-u.5
for
103157007

.
zma-u.5
for
103626516

.
zma-u.5
for
100284994

.


Ortholog ID: 1311
Species ath ath gma gma sly sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre sbi sbi sot sot cit cit bdi bdi nta nta
Symbol AT3G16080 AT1G52300 LOC100306503 LOC100527725 RPL37 LOC101248112 LOC4344579 LOC4328048 LOC103157007 LOC103626516 LOC103868513 LOC103869855 LOC100253219 LOC100247371 LOC7495722 LOC7483529 LOC11435273 LOC25480464 LOC123135524 LOC123131699 LOC123402129 LOC123401459 LOC107949592 LOC107951909 LOC106452231 LOC106345738 CHLRE_10g430400v5 LOC8080444 LOC8066508 LOC102590343 LOC102586017 LOC102617479 LOC102612210 LOC100831650 LOC100827072 LOC107784204 LOC107832335
Function* Zinc-binding ribosomal protein family protein Zinc-binding ribosomal protein family protein 60S ribosomal protein L37 60S ribosomal protein L37-3 60S ribosomal protein L37 large ribosomal subunit protein eL37y large ribosomal subunit protein eL37z large ribosomal subunit protein eL37z 60S ribosomal protein L37-like 60S ribosomal protein L37-like 60S ribosomal protein L37-2 60S ribosomal protein L37-2 large ribosomal subunit protein eL37x large ribosomal subunit protein eL37x 60S ribosomal protein L37-1 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-2 60S ribosomal protein L37-2 60S ribosomal protein L37-2-like 60S ribosomal protein L37-2 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-2 60S ribosomal protein L37-2 ribosomal protein L37 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-like 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-3 60S ribosomal protein L37-2 60S ribosomal protein L37-3 large ribosomal subunit protein eL37 large ribosomal subunit protein eL37
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03010 Ribosome 21
ath04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 16
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03010 Ribosome 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 14
hvu03018 RNA degradation 3
hvu03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03010 Ribosome 4
ghi03013 Nucleocytoplasmic transport 2
ghi03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03010 Ribosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 14
sbi03008 Ribosome biogenesis in eukaryotes 2
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 15
sot04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03010 Ribosome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 21
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 20
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03010 Ribosome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 10
nta03018 RNA degradation 2
nta03040 Spliceosome 2
nta04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 820853 841660 100306503 100527725 544291 101248112 4344579 4328048 103157007 103626516 103868513 103869855 100253219 100247371 7495722 7483529 11435273 25480464 123135524 123131699 123402129 123401459 107949592 107951909 106452231 106345738 5728094 8080444 8066508 102590343 102586017 102617479 102612210 100831650 100827072 107784204 107832335
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