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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107954125   F-box protein At2g27310 
 ghi-r.1   107959212   F-box protein At2g27310 
 ghi-r.1   107948445   probable F-box protein At2g36090 
 ghi-r.1   107906681   F-box protein At2g27310 
 ath-u.5   AT2G27310   F-box family protein 
 ath-u.5   AT2G36090   F-box family protein 
 ath-u.5   AT3G44326   F-box family protein 
 bra-r.6   103867316   probable F-box protein At2g36090 
 bra-r.6   103858325   F-box protein At2g27310 
 bra-r.6   103865515   probable F-box protein At2g36090 
 bna-r.1   106446756   F-box protein At2g27310-like 
 bna-r.1   106438419   F-box protein At2g27310-like 
 bna-r.1   106424233   F-box protein At2g27310 
 cit-r.1   107177531   probable F-box protein At2g36090 
 cit-r.1   107177519   probable F-box protein At2g36090 
 cit-r.1   107177479   probable F-box protein At2g36090 
 gma-u.5   100792841   probable F-box protein At2g36090 
 gma-u.5   100778648   probable F-box protein At2g36090 
 gma-u.5   100780612   probable F-box protein At2g36090 
 vvi-u.5   100244949   F-box protein At2g27310 
 ppo-u.5   7478570   F-box protein At2g27310 
 ppo-u.5   18098085   F-box protein At2g27310 
 ppo-u.5   18100622   probable F-box protein At2g36090 
 mtr-u.5   25492259   F-box protein At2g27310 
 mtr-u.5   25499417   probable F-box protein At2g36090 
 mtr-u.5   11417523   F-box protein At2g27310 
 sly-u.5   101254746   probable F-box protein At2g36090 
 sly-u.5   101266189   F-box protein At2g27310 
 sot-r.1   102606243   probable F-box protein At1g60180 
 nta-r.1   107795903   putative F-box protein At2g36090 
 nta-r.1   107827181   putative F-box protein At2g36090 
 nta-r.1   107812335   F-box protein At2g27310 
 osa-u.5   9266054   probable F-box protein At2g36090 
 osa-u.5   4349817   probable F-box protein At2g36090 
 zma-u.5   100284845   F-box domain containing protein 
 zma-u.5   103641623   probable F-box protein At2g36090 
 hvu-r.1   123446214   probable F-box protein At2g36090 
 hvu-r.1   123440441   probable F-box protein At2g36090 
 sbi-r.1   8058655   probable F-box protein At2g36090 
 sbi-r.1   8070645   probable F-box protein At2g36090 
 bdi-r.1   100827007   probable F-box protein At2g36090 
 bdi-r.1   100840271   probable F-box protein At2g36090 
 bdi-r.1   100840762   probable F-box protein At2g36090 

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Top 50 coexpressed genes to 107954125 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107954125 (ghi-r.1 coexpression data)

CoexMap"107954125"


ghiLOC107954125 | Entrez gene ID : 107954125    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma hvu sbi bdi cre tae
Paralog 4 3 3 3 3 3 1 3 3 2 1 3 2 2 2 2 3 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016745088.2 [sequence] [blastp]
Subcellular
localization
wolf
vacu 3,  nucl 2,  cyto 1,  extr 1,  nucl_plas 1,  E.R._vacu 1  (predict for XP_016745088.2)
Subcellular
localization
TargetP
other 6  (predict for XP_016745088.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107954125
ghi-r.1
for
107959212
ghi-r.1
for
107948445
ghi-r.1
for
107906681
ath-u.5
for
AT2G27310
ath-u.5
for
AT2G36090
ath-u.5
for
AT3G44326
bra-r.6
for
103867316
bra-r.6
for
103858325
bra-r.6
for
103865515
bna-r.1
for
106446756
bna-r.1
for
106438419
bna-r.1
for
106424233
cit-r.1
for
107177531
cit-r.1
for
107177519
cit-r.1
for
107177479
gma-u.5
for
100792841
gma-u.5
for
100778648
gma-u.5
for
100780612
vvi-u.5
for
100244949
ppo-u.5
for
7478570
ppo-u.5
for
18098085
ppo-u.5
for
18100622
mtr-u.5
for
25492259
mtr-u.5
for
25499417
mtr-u.5
for
11417523
sly-u.5
for
101254746
sly-u.5
for
101266189
sot-r.1
for
102606243
nta-r.1
for
107795903
nta-r.1
for
107827181
nta-r.1
for
107812335
osa-u.5
for
9266054
osa-u.5
for
4349817
zma-u.5
for
100284845
zma-u.5
for
103641623
hvu-r.1
for
123446214
hvu-r.1
for
123440441
sbi-r.1
for
8058655
sbi-r.1
for
8070645
bdi-r.1
for
100827007
bdi-r.1
for
100840271
bdi-r.1
for
100840762


Ortholog ID: 1167
Species ghi ghi ghi ath ath ath bra bra bra bna bna bna cit cit cit gma gma gma vvi ppo ppo ppo mtr mtr mtr sly sly sot nta nta nta osa osa zma zma tae hvu sbi sbi bdi bdi
Symbol LOC107906681 LOC107899739 LOC121232200 AT2G27310 AT2G36090 AT3G44326 LOC103867316 LOC103858325 LOC103865515 LOC106438419 LOC125606405 LOC106450217 LOC107177479 LOC107177498 LOC107175713 LOC100792841 LOC100780612 LOC100781337 LOC100244949 LOC7478570 LOC18098085 LOC18100622 LOC25492259 LOC25499417 LOC25483777 LOC101254746 LOC101266189 LOC102606243 LOC107795903 LOC107827181 LOC107811531 LOC9266054 LOC4349817 LOC103641623 LOC109939569 LOC123091493 LOC123440441 LOC8058655 LOC8072992 LOC100840271 LOC100840762
Function* F-box protein At2g27310 probable F-box protein At2g36090 F-box protein At2g27310 F-box family protein F-box family protein F-box family protein probable F-box protein At2g36090 F-box protein At2g27310 probable F-box protein At2g36090 F-box protein At2g27310-like probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 F-box protein At2g27310 F-box protein At2g27310 F-box protein At2g27310 F-box protein At2g27310 probable F-box protein At2g36090 F-box protein At2g27310 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 F-box protein At2g27310 probable F-box protein At1g60180 putative F-box protein At2g36090 putative F-box protein At2g36090 F-box protein At2g27310-like probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090 probable F-box protein At2g36090
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00620 Pyruvate metabolism 8
ghi01200 Carbon metabolism 8
ghi00010 Glycolysis / Gluconeogenesis 6
ghi00020 Citrate cycle (TCA cycle) 6
ghi00785 Lipoic acid metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 2
ghi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04075 Plant hormone signal transduction 3
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03013 Nucleocytoplasmic transport 2
gma00562 Inositol phosphate metabolism 2
gma04070 Phosphatidylinositol signaling system 2
gma04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 3
gma04075 Plant hormone signal transduction 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04016 MAPK signaling pathway - plant 4
ppo04075 Plant hormone signal transduction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00900 Terpenoid backbone biosynthesis 10
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00051 Fructose and mannose metabolism 4
sly01230 Biosynthesis of amino acids 4
sly00710 Carbon fixation by Calvin cycle 3
sly01200 Carbon metabolism 3
sly00250 Alanine, aspartate and glutamate metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04016 MAPK signaling pathway - plant 2
osa04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00480 Glutathione metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00196 Photosynthesis - antenna proteins 7
bdi00904 Diterpenoid biosynthesis 2
bdi00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107906681 107899739 121232200 817274 818182 3769632 103867316 103858325 103865515 106438419 125606405 106450217 107177479 107177498 107175713 100792841 100780612 100781337 100244949 7478570 18098085 18100622 25492259 25499417 25483777 101254746 101266189 102606243 107795903 107827181 107811531 9266054 4349817 103641623 109939569 123091493 123440441 8058655 8072992 100840271 100840762
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