ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107954183	asparagine synthetase [glutamine-hydrolyzing] 1
ath-u.5	ASN3	asparagine synthetase 3
ath-u.5	ASN2	asparagine synthetase 2
ath-u.5	ASN1	glutamine-dependent asparagine synthase 1
gma-u.5	100798318	asparagine synthetase [glutamine-hydrolyzing] 2
gma-u.5	100797022	asparagine synthetase-like
gma-u.5	100788806	asparagine synthetase [glutamine-hydrolyzing] 3
vvi-u.5	100241610	asparagine synthetase [glutamine-hydrolyzing]-like
ppo-u.5	7496783	asparagine synthetase [glutamine-hydrolyzing] 1
ppo-u.5	7471507	asparagine synthetase [glutamine-hydrolyzing] 2
ppo-u.5	7454859	asparagine synthetase [glutamine-hydrolyzing] 1
mtr-u.5	25490923	asparagine synthetase, nodule [glutamine-hydrolyzing]
mtr-u.5	11426313	asparagine synthetase, root [glutamine-hydrolyzing]
mtr-u.5	11422697	asparagine synthetase [glutamine-hydrolyzing] 2
sly-u.5	AS1	asparagine synthetase 1
sly-u.5	101259236	asparagine synthetase [glutamine-hydrolyzing] 2
osa-u.5	4340706	asparagine synthetase [glutamine-hydrolyzing] 2-like
osa-u.5	4332506	asparagine synthetase [glutamine-hydrolyzing] 1-like
zma-u.5	100192350	asparagine synthetase 3
zma-u.5	100192349	asparagine synthetase 2
zma-u.5	100192351	asparagine synthetase 4

Top 50 coexpressed genes to 107954183 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107954183 (ghi-r.1 coexpression data)

CoexMap"107954183"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00250 [list] [network] Alanine, aspartate and glutamate metabolism (131 genes)

ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)

GO BP

GO CC

GO:0005829 [list] [network] cytosol

(2580 genes)

IEA

GO MF

GO:0004066 [list] [network] asparagine synthase (glutamine-hydrolyzing) activity

(14 genes)

IEA

Protein

XP_016745159.2 [sequence] [blastp]

Subcellular
localization
wolf

cyto 5, cysk 4, chlo 1, nucl 1

(predict for XP_016745159.2)

Subcellular
localization
TargetP

other 5, chlo 3

(predict for XP_016745159.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107954183	ath-u.5 for ASN3	ath-u.5 for ASN2	ath-u.5 for ASN1	gma-u.5 for 100798318	gma-u.5 for 100797022	gma-u.5 for 100788806	vvi-u.5 for 100241610	ppo-u.5 for 7496783	ppo-u.5 for 7471507	ppo-u.5 for 7454859	mtr-u.5 for 25490923	mtr-u.5 for 11426313	mtr-u.5 for 11422697	sly-u.5 for AS1	sly-u.5 for 101259236	osa-u.5 for 4340706	osa-u.5 for 4332506	zma-u.5 for 100192350	zma-u.5 for 100192349	zma-u.5 for 100192351

Ortholog

Ortholog ID: 1238

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107954183

LOC107940886

ASN2

ASN1

AS2

AS1

Function^*

asparagine synthetase [glutamine-hydrolyzing] 1

asparagine synthetase 2

glutamine-dependent asparagine synthase 1

asparagine synthetase [glutamine-hydrolyzing]-like

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing] 3-like

asparagine synthetase [glutamine-hydrolyzing]-like

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing] 1

asparagine synthetase

asparagine synthetase 2

asparagine synthetase [glutamine-hydrolyzing]-like

asparagine synthetase [glutamine-hydrolyzing] 1

asparagine synthetase, root [glutamine-hydrolyzing]

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase 1

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing]

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing]

asparagine synthetase [glutamine-hydrolyzing] 1-like

asparagine synthetase [glutamine-hydrolyzing] 2-like

asparagine synthetase 2

asparagine synthetase 3

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing]-like

asparagine synthetase [glutamine-hydrolyzing] 2-like

asparagine synthetase [glutamine-hydrolyzing] 1

asparagine synthetase [glutamine-hydrolyzing] 2

asparagine synthetase [glutamine-hydrolyzing]

asparagine synthetase [glutamine-hydrolyzing] 1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	8
ghi01230	Biosynthesis of amino acids	8
ghi00270	Cysteine and methionine metabolism	3
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00250	Alanine, aspartate and glutamate metabolism	8
ghi01230	Biosynthesis of amino acids	8
ghi00270	Cysteine and methionine metabolism	2
ghi00740	Riboflavin metabolism	2
ghi04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	3
ath00910	Nitrogen metabolism	3
ath01310	Nitrogen cycle	3
ath01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00280	Valine, leucine and isoleucine degradation	8
ath01210	2-Oxocarboxylic acid metabolism	5
ath01230	Biosynthesis of amino acids	4
ath00640	Propanoate metabolism	4
ath00785	Lipoic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	7
bra01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	9
bna00250	Alanine, aspartate and glutamate metabolism	2
bna01230	Biosynthesis of amino acids	2
bna03015	mRNA surveillance pathway	2
bna03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00250	Alanine, aspartate and glutamate metabolism	5
bna01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00670	One carbon pool by folate	2
cit01200	Carbon metabolism	2
cit01230	Biosynthesis of amino acids	2
cit01240	Biosynthesis of cofactors	2
cit00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00250	Alanine, aspartate and glutamate metabolism	3
gma01230	Biosynthesis of amino acids	3
gma04082	Neuroactive ligand signaling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00250	Alanine, aspartate and glutamate metabolism	2
gma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00250	Alanine, aspartate and glutamate metabolism	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00910	Nitrogen metabolism	3
mtr01310	Nitrogen cycle	3
mtr00195	Photosynthesis	2
mtr00250	Alanine, aspartate and glutamate metabolism	2
mtr01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	2
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04141	Protein processing in endoplasmic reticulum	4
sly01230	Biosynthesis of amino acids	2
sly00280	Valine, leucine and isoleucine degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01230	Biosynthesis of amino acids	11
sly00300	Lysine biosynthesis	4
sly00260	Glycine, serine and threonine metabolism	3
sly01240	Biosynthesis of cofactors	3
sly01210	2-Oxocarboxylic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04141	Protein processing in endoplasmic reticulum	3
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot01250	Biosynthesis of nucleotide sugars	2
sot01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01230	Biosynthesis of amino acids	10
nta00620	Pyruvate metabolism	4
nta00250	Alanine, aspartate and glutamate metabolism	4
nta00340	Histidine metabolism	2
nta00290	Valine, leucine and isoleucine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00910	Nitrogen metabolism	5
nta00250	Alanine, aspartate and glutamate metabolism	4
nta01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00511	Other glycan degradation	4
osa00052	Galactose metabolism	2
osa00600	Sphingolipid metabolism	2
osa00030	Pentose phosphate pathway	2
osa00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01230	Biosynthesis of amino acids	7
osa00250	Alanine, aspartate and glutamate metabolism	4
osa01210	2-Oxocarboxylic acid metabolism	4
osa00230	Purine metabolism	4
osa01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00270	Cysteine and methionine metabolism	3
zma01230	Biosynthesis of amino acids	3
zma00250	Alanine, aspartate and glutamate metabolism	3
zma00260	Glycine, serine and threonine metabolism	2
zma00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma01230	Biosynthesis of amino acids	3
zma04082	Neuroactive ligand signaling	2
zma04148	Efferocytosis	2
zma00250	Alanine, aspartate and glutamate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01230	Biosynthesis of amino acids	7
tae00250	Alanine, aspartate and glutamate metabolism	4
tae00300	Lysine biosynthesis	3
tae00470	D-Amino acid metabolism	3
tae00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00250	Alanine, aspartate and glutamate metabolism	5
tae01230	Biosynthesis of amino acids	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03010	Ribosome	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00010	Glycolysis / Gluconeogenesis	2
sbi01200	Carbon metabolism	2
sbi00071	Fatty acid degradation	2
sbi00592	alpha-Linolenic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00280	Valine, leucine and isoleucine degradation	6
bdi00640	Propanoate metabolism	3
bdi00785	Lipoic acid metabolism	2
bdi01210	2-Oxocarboxylic acid metabolism	2
bdi00450	Selenocompound metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00940	Phenylpropanoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	5
cre00970	Aminoacyl-tRNA biosynthesis	4
cre00290	Valine, leucine and isoleucine biosynthesis	2
cre01210	2-Oxocarboxylic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107954183

107940886

836625

823888

103873584

103873925

106384906

106355468

102618937

102628580

547877

547894

100241610

7496783

7454859

11426313

11422697

543875

101259236

102585634

102577576

107792671

107830560

4332506

4340706

100192349

100192350

123144757

123077176

123451949

110430248

8065772

100839462

100830770

5727678

The preparation time of this page was 0.1 [sec].


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	3	3	1	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107954183 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107954183 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**