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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107955223   U-box domain-containing protein 9 
 ath-u.5   PUB9   plant U-box 9 
 gma-u.5   100809408   U-box domain-containing protein 9 
 gma-u.5   100776534   U-box domain-containing protein 9 
 gma-u.5   100777031   U-box domain-containing protein 9 
 vvi-u.5   100267223   U-box domain-containing protein 9 
 vvi-u.5   100264137   U-box domain-containing protein 9 
 ppo-u.5   7471176   U-box domain-containing protein 9 
 ppo-u.5   18108218   U-box domain-containing protein 9 
 mtr-u.5   25498179   U-box domain-containing protein 9 
 mtr-u.5   11435137   U-box domain-containing protein 9 
 sly-u.5   101259432   U-box domain-containing protein 9-like 
 sly-u.5   101262653   U-box domain-containing protein 9 
 osa-u.5   4335543   U-box domain-containing protein 9 
 osa-u.5   9267566   U-box domain-containing protein 9 
 zma-u.5   100284415   uncharacterized LOC100284415 

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Top 50 coexpressed genes to 107955223 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107955223 (ghi-r.1 coexpression data)

CoexMap"107955223"


ghiLOC107955223 | Entrez gene ID : 107955223    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 3 2 2 2 2 2 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0016567 [list] [network] protein ubiquitination  (962 genes)  IEA  
GO CC
GO MF
GO:0004842 [list] [network] ubiquitin-protein transferase activity  (871 genes)  IEA  
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_040973906.1 [sequence] [blastp]
Subcellular
localization
wolf
E.R. 2,  nucl 1,  chlo 1,  mito 1,  chlo_mito 1,  cysk_nucl 1,  E.R._vacu 1,  E.R._plas 1,  cyto_E.R. 1  (predict for XP_040973906.1)
Subcellular
localization
TargetP
other 6,  mito 3  (predict for XP_040973906.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107955223
ath-u.5
for
PUB9
gma-u.5
for
100809408
gma-u.5
for
100776534
gma-u.5
for
100777031
vvi-u.5
for
100267223
vvi-u.5
for
100264137
ppo-u.5
for
7471176
ppo-u.5
for
18108218
mtr-u.5
for
25498179
mtr-u.5
for
11435137
sly-u.5
for
101259432
sly-u.5
for
101262653
osa-u.5
for
4335543
osa-u.5
for
9267566
zma-u.5
for
100284415


Ortholog ID: 2217
Species ghi ghi bra bra bna bna cit cit gma gma vvi vvi ppo mtr sly nta nta osa osa zma tae tae hvu sbi bdi bdi cre
Symbol LOC107954688 LOC107955223 LOC103859214 LOC103849333 LOC106401284 LOC125601811 LOC102616910 LOC102621286 LOC100777031 LOC100776534 LOC100264137 LOC100267223 LOC18108218 LOC25498179 LOC101262653 LOC107821079 LOC107804475 LOC9267566 LOC4335543 LOC100284415 LOC123188996 LOC123053088 LOC123426471 LOC8056679 LOC100841754 LOC100845248 CHLRE_03g178550v5
Function* U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9-like U-box domain-containing protein 9 U-box domain-containing protein 9-like U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 uncharacterized LOC100284415 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 U-box domain-containing protein 9 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04075 Plant hormone signal transduction 3
bra04712 Circadian rhythm - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00053 Ascorbate and aldarate metabolism 2
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra01240 Biosynthesis of cofactors 2
bra01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00906 Carotenoid biosynthesis 2
cit04016 MAPK signaling pathway - plant 2
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00785 Lipoic acid metabolism 2
gma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04626 Plant-pathogen interaction 3
vvi00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04075 Plant hormone signal transduction 8
ppo04016 MAPK signaling pathway - plant 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01240 Biosynthesis of cofactors 4
nta01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00053 Ascorbate and aldarate metabolism 4
nta00520 Amino sugar and nucleotide sugar metabolism 4
nta01240 Biosynthesis of cofactors 4
nta01250 Biosynthesis of nucleotide sugars 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04141 Protein processing in endoplasmic reticulum 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107954688 107955223 103859214 103849333 106401284 125601811 102616910 102621286 100777031 100776534 100264137 100267223 18108218 25498179 101262653 107821079 107804475 9267566 4335543 100284415 123188996 123053088 123426471 8056679 100841754 100845248 5728814
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