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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107955412   uncharacterized LOC107955412 
 ghi-r.1   107925714   protein unc-80 homolog 
 cit-r.1   102613459   uncharacterized LOC102613459 
 gma-u.5   100812713   uncharacterized LOC100812713 
 gma-u.5   100788436   TPR transcription factor 
 vvi-u.5   100254834   uncharacterized LOC100254834 
 ppo-u.5   7461489   uncharacterized LOC7461489 
 mtr-u.5   11425226   uncharacterized LOC11425226 
 mtr-u.5   11446470   uncharacterized LOC11446470 
 sly-u.5   101248132   uncharacterized LOC101248132 
 sot-r.1   102584432   uncharacterized LOC102584432 
 nta-r.1   107789602   uncharacterized LOC107789602 
 nta-r.1   107762264   uncharacterized LOC107762264 
 nta-r.1   142168645   uncharacterized LOC142168645 
 osa-u.5   4331573   uncharacterized LOC4331573 
 osa-u.5   4336372   uncharacterized LOC4336372 
 zma-u.5   100277637   uncharacterized LOC100277637 
 zma-u.5   100382755   Tetratricopeptide repeat (TPR)-like superfamily protein 
 tae-r.2   123093742   nuclear receptor coactivator 2 
 tae-r.2   123189767   uncharacterized LOC123189767 
 tae-r.2   123105916   uncharacterized LOC123105916 
 hvu-r.1   123430508   uncharacterized LOC123430508 
 hvu-r.1   123449856   uncharacterized LOC123449856 
 sbi-r.1   8075923   uncharacterized LOC8075923 
 sbi-r.1   8085508   uncharacterized LOC8085508 
 bdi-r.1   100836692   uncharacterized LOC100836692 
 bdi-r.1   100835904   uncharacterized LOC100835904 

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Top 50 coexpressed genes to 107955412 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107955412 (ghi-r.1 coexpression data)

CoexMap"107955412"


ghiLOC107955412 | Entrez gene ID : 107955412    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi ath bna bra cre
Paralog 2 1 2 1 1 2 1 1 3 2 2 3 2 2 2 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006396 [list] [network] RNA processing  (1369 genes)  IEA  
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016746686.1 [sequence] [blastp]
XP_040972676.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 4,  chlo 3,  extr 2,  cyto_nucl 2  (predict for XP_016746686.1)
nucl 5,  chlo 4,  plas 1,  extr 1  (predict for XP_040972676.1)
Subcellular
localization
TargetP
chlo 7  (predict for XP_016746686.1)
mito 1  (predict for XP_040972676.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107955412
ghi-r.1
for
107925714
cit-r.1
for
102613459
gma-u.5
for
100812713
gma-u.5
for
100788436
vvi-u.5
for
100254834
ppo-u.5
for
7461489
mtr-u.5
for
11425226
mtr-u.5
for
11446470
sly-u.5
for
101248132
sot-r.1
for
102584432
nta-r.1
for
107789602
nta-r.1
for
107762264
nta-r.1
for
142168645
osa-u.5
for
4331573
osa-u.5
for
4336372
zma-u.5
for
100277637
zma-u.5
for
100382755
tae-r.2
for
123093742
tae-r.2
for
123189767
tae-r.2
for
123105916
hvu-r.1
for
123430508
hvu-r.1
for
123449856
sbi-r.1
for
8075923
sbi-r.1
for
8085508
bdi-r.1
for
100836692
bdi-r.1
for
100835904


Ortholog ID: 8342
Species ghi ghi cit gma gma vvi ppo mtr mtr sly sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC107955412 LOC107925714 LOC102613459 LOC100812713 LOC100788436 LOC100254834 LOC7461489 LOC11425226 LOC11446470 LOC101248132 LOC102584432 LOC107789602 LOC107762264 LOC142168645 LOC4331573 LOC4336372 LOC100277637 LOC100382755 LOC123189767 LOC123105916 LOC123049598 LOC123430508 LOC123449856 LOC8075923 LOC8085508 LOC100836692 LOC100835904
Function* uncharacterized LOC107955412 protein unc-80 homolog uncharacterized LOC102613459 uncharacterized LOC100812713 TPR transcription factor uncharacterized LOC100254834 uncharacterized LOC7461489 uncharacterized LOC11425226 uncharacterized LOC11446470 uncharacterized LOC101248132 uncharacterized LOC102584432 uncharacterized LOC107789602 uncharacterized LOC107762264 uncharacterized LOC142168645 uncharacterized LOC4331573 uncharacterized LOC4336372 uncharacterized LOC100277637 Tetratricopeptide repeat (TPR)-like superfamily protein uncharacterized LOC123189767 uncharacterized LOC123105916 uncharacterized LOC123049598 uncharacterized LOC123430508 uncharacterized LOC123449856 uncharacterized LOC8075923 uncharacterized LOC8085508 uncharacterized LOC100836692 uncharacterized LOC100835904
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00500 Starch and sucrose metabolism 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00562 Inositol phosphate metabolism 4
gma04016 MAPK signaling pathway - plant 2
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00500 Starch and sucrose metabolism 5
sly00520 Amino sugar and nucleotide sugar metabolism 4
sly01250 Biosynthesis of nucleotide sugars 4
sly00260 Glycine, serine and threonine metabolism 3
sly01200 Carbon metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00500 Starch and sucrose metabolism 5
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa01240 Biosynthesis of cofactors 3
osa00790 Folate biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04016 MAPK signaling pathway - plant 3
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107955412 107925714 102613459 100812713 100788436 100254834 7461489 11425226 11446470 101248132 102584432 107789602 107762264 142168645 4331573 4336372 100277637 100382755 123189767 123105916 123049598 123430508 123449856 8075923 8085508 100836692 100835904
The preparation time of this page was 1.6 [sec].