ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107957414	uncharacterized membrane protein YMR155W
ghi-r.1	107904150	protein NUCLEAR FUSION DEFECTIVE 4
ghi-r.1	107906274	uncharacterized LOC107906274
ath-u.5	AT2G28120	Major facilitator superfamily protein
ath-u.5	AT2G39210	Major facilitator superfamily protein
bra-r.6	103867059	protein NUCLEAR FUSION DEFECTIVE 4
bra-r.6	103865707	protein NUCLEAR FUSION DEFECTIVE 4
bra-r.6	103864824	protein NUCLEAR FUSION DEFECTIVE 4
bna-r.1	111205881	protein NUCLEAR FUSION DEFECTIVE 4-like
bna-r.1	106450990	protein NUCLEAR FUSION DEFECTIVE 4
bna-r.1	106448920	protein NUCLEAR FUSION DEFECTIVE 4-like
cit-r.1	102627686	protein NUCLEAR FUSION DEFECTIVE 4-like
cit-r.1	102630186	protein NUCLEAR FUSION DEFECTIVE 4
gma-u.5	732549	nitrate and chloride transporter
gma-u.5	100819661	uncharacterized LOC100819661
gma-u.5	100819121	uncharacterized LOC100819121
vvi-u.5	100244770	protein NUCLEAR FUSION DEFECTIVE 4
vvi-u.5	100244916	protein NUCLEAR FUSION DEFECTIVE 4
ppo-u.5	7463316	protein NUCLEAR FUSION DEFECTIVE 4
ppo-u.5	18098243	protein NUCLEAR FUSION DEFECTIVE 4
mtr-u.5	11425040	protein NUCLEAR FUSION DEFECTIVE 4
mtr-u.5	25485542	uncharacterized LOC25485542
mtr-u.5	25485544	protein NUCLEAR FUSION DEFECTIVE 4
sly-u.5	101244136	protein NUCLEAR FUSION DEFECTIVE 4
sly-u.5	101244433	protein NUCLEAR FUSION DEFECTIVE 4
sly-u.5	101251293	protein NUCLEAR FUSION DEFECTIVE 4-like
sot-r.1	102587756	protein NUCLEAR FUSION DEFECTIVE 4-like
sot-r.1	102602726	protein NUCLEAR FUSION DEFECTIVE 4
nta-r.1	107762691	protein NUCLEAR FUSION DEFECTIVE 4-like
nta-r.1	107763483	protein NUCLEAR FUSION DEFECTIVE 4-like
osa-u.5	107276699	protein NUCLEAR FUSION DEFECTIVE 4
osa-u.5	4334447	protein NUCLEAR FUSION DEFECTIVE 4
osa-u.5	4342602	protein NUCLEAR FUSION DEFECTIVE 4
zma-u.5	103644191	uncharacterized LOC103644191
zma-u.5	103644190	uncharacterized LOC103644190
zma-u.5	103632070	uncharacterized LOC103632070
hvu-r.1	123447136	protein NUCLEAR FUSION DEFECTIVE 4-like
hvu-r.1	123444913	protein NUCLEAR FUSION DEFECTIVE 4-like
hvu-r.1	123410393	uncharacterized LOC123410393
sbi-r.1	8056713	protein NUCLEAR FUSION DEFECTIVE 4
sbi-r.1	8063634	protein NUCLEAR FUSION DEFECTIVE 4
sbi-r.1	8081237	uncharacterized LOC8081237
bdi-r.1	100828435	protein NUCLEAR FUSION DEFECTIVE 4
bdi-r.1	100830563	uncharacterized LOC100830563

Top 50 coexpressed genes to 107957414 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107957414 (ghi-r.1 coexpression data)

CoexMap"107957414"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0016020 [list] [network] membrane

(8195 genes)

IEA

GO MF

Protein

XP_016748422.2 [sequence] [blastp]

Subcellular
localization
wolf

vacu 6, plas 2, golg 1

(predict for XP_016748422.2)

Subcellular
localization
TargetP

other 5, mito 3

(predict for XP_016748422.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107957414	ghi-r.1 for 107904150	ghi-r.1 for 107906274	ath-u.5 for AT2G28120	ath-u.5 for AT2G39210	bra-r.6 for 103867059	bra-r.6 for 103865707	bra-r.6 for 103864824	bna-r.1 for 111205881	bna-r.1 for 106450990	bna-r.1 for 106448920	cit-r.1 for 102627686	cit-r.1 for 102630186	gma-u.5 for 732549	gma-u.5 for 100819661	gma-u.5 for 100819121	vvi-u.5 for 100244770	vvi-u.5 for 100244916	ppo-u.5 for 7463316	ppo-u.5 for 18098243	mtr-u.5 for 11425040	mtr-u.5 for 25485542	mtr-u.5 for 25485544	sly-u.5 for 101244136	sly-u.5 for 101244433	sly-u.5 for 101251293	sot-r.1 for 102587756	sot-r.1 for 102602726	nta-r.1 for 107762691	nta-r.1 for 107763483	osa-u.5 for 107276699	osa-u.5 for 4334447	osa-u.5 for 4342602	zma-u.5 for 103644191	zma-u.5 for 103644190	zma-u.5 for 103632070	hvu-r.1 for 123447136	hvu-r.1 for 123444913	hvu-r.1 for 123410393	sbi-r.1 for 8056713	sbi-r.1 for 8063634	sbi-r.1 for 8081237	bdi-r.1 for 100828435	bdi-r.1 for 100830563

Ortholog

Ortholog ID: 386

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

hvu

sbi

bdi

Symbol

Function^*

protein NUCLEAR FUSION DEFECTIVE 4

Major facilitator superfamily protein

protein NUCLEAR FUSION DEFECTIVE 4

protein NUCLEAR FUSION DEFECTIVE 4-like

protein NUCLEAR FUSION DEFECTIVE 4

uncharacterized LOC100818752

protein NUCLEAR FUSION DEFECTIVE 4

protein NUCLEAR FUSION DEFECTIVE 4-like

uncharacterized LOC102590503

uncharacterized membrane protein YMR155W-like

protein NUCLEAR FUSION DEFECTIVE 4-like

protein NUCLEAR FUSION DEFECTIVE 4

uncharacterized LOC103644191

uncharacterized LOC103644190

uncharacterized LOC100273339

protein NUCLEAR FUSION DEFECTIVE 4-like

uncharacterized LOC123452773

uncharacterized LOC8081237

protein NUCLEAR FUSION DEFECTIVE 4

uncharacterized membrane protein YMR155W

protein NUCLEAR FUSION DEFECTIVE 4

uncharacterized LOC100830563

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04016	MAPK signaling pathway - plant	4
ath04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00480	Glutathione metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04016	MAPK signaling pathway - plant	2
cit04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00941	Flavonoid biosynthesis	3
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04626	Plant-pathogen interaction	3
mtr00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	6
sly04075	Plant hormone signal transduction	6
sly00940	Phenylpropanoid biosynthesis	3
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00514	Other types of O-glycan biosynthesis	2
nta04142	Lysosome	2
nta04144	Endocytosis	2
nta05100	Bacterial invasion of epithelial cells	2
nta04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	3
zma04016	MAPK signaling pathway - plant	2
zma00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	5
sbi04120	Ubiquitin mediated proteolysis	2
sbi04075	Plant hormone signal transduction	2
sbi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04712	Circadian rhythm - plant	2

Expression

Expression pattern

Entrez Gene ID^*

107915793

107893348

817358

818506

103867059

103865707

103857852

106450990

106448920

106423871

102627686

102630186

100818752

100808975

100782396

100244770

100266758

18098243

18101355

11425040

11429423

11436597

101244433

101265191

101257997

102590503

102590547

107762691

107763483

107821593

4334447

4342602

103644191

103644190

100273339

123447136

123452773

8081237

8071539

8064070

100828435

100830563

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	hvu	sbi	bdi	cre	tae
Paralog	3	2	3	3	2	3	2	2	3	3	2	2	3	3	3	3	2	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107957414 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107957414 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**