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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107957974   calcium-transporting ATPase 1, endoplasmic reticulum-type 
 ath-u.5   ECA2   ER-type Ca2+-ATPase 2 
 ath-u.5   ECA4   endomembrane-type CA-ATPase 4 
 ath-u.5   ECA1   ER-type Ca2+-ATPase 1 
 gma-u.5   100783509   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 gma-u.5   100812151   calcium-transporting ATPase 1, endoplasmic reticulum-type 
 gma-u.5   100800498   calcium-transporting ATPase, endoplasmic reticulum-type 
 vvi-u.5   100253574   calcium-transporting ATPase, endoplasmic reticulum-type 
 vvi-u.5   100266003   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 vvi-u.5   100248326   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 ppo-u.5   7486789   calcium-transporting ATPase, endoplasmic reticulum-type 
 ppo-u.5   18095022   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 ppo-u.5   7488148   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 mtr-u.5   25489978   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 mtr-u.5   11439860   calcium-transporting ATPase, endoplasmic reticulum-type 
 mtr-u.5   11420948   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 sly-u.5   101256303   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 sly-u.5   101257236   calcium-transporting ATPase 4, endoplasmic reticulum-type-like 
 sly-u.5   LCA1   Ca2+-ATPase 
 osa-u.5   4337647   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 osa-u.5   4333998   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 osa-u.5   4332447   calcium-transporting ATPase 4, endoplasmic reticulum-type 
 zma-u.5   103635958   uncharacterized LOC103635958 
 zma-u.5   103643958   calcium-transporting ATPase 3, endoplasmic reticulum-type 
 zma-u.5   103639290   calcium-transporting ATPase 4, endoplasmic reticulum-type 

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Top 50 coexpressed genes to 107957974 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107957974 (ghi-r.1 coexpression data)

CoexMap"107957974"


ghiLOC107957974 | Entrez gene ID : 107957974    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 3 3 3 3 3 3 3 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006874 [list] [network] intracellular calcium ion homeostasis  (76 genes)  IEA  
GO:0070588 [list] [network] calcium ion transmembrane transport  (105 genes)  IEA  
GO CC
GO:0016020 [list] [network] membrane  (8195 genes)  IEA  
GO MF
GO:0005388 [list] [network] P-type calcium transporter activity  (45 genes)  IEA  
GO:0016887 [list] [network] ATP hydrolysis activity  (974 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016749099.2 [sequence] [blastp]
Subcellular
localization
wolf
plas 8,  E.R. 1  (predict for XP_016749099.2)
Subcellular
localization
TargetP
other 8  (predict for XP_016749099.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107957974
ath-u.5
for
ECA2
ath-u.5
for
ECA4
ath-u.5
for
ECA1
gma-u.5
for
100783509
gma-u.5
for
100812151
gma-u.5
for
100800498
vvi-u.5
for
100253574
vvi-u.5
for
100266003
vvi-u.5
for
100248326
ppo-u.5
for
7486789
ppo-u.5
for
18095022
ppo-u.5
for
7488148
mtr-u.5
for
25489978
mtr-u.5
for
11439860
mtr-u.5
for
11420948
sly-u.5
for
101256303
sly-u.5
for
101257236
sly-u.5
for
LCA1
osa-u.5
for
4337647
osa-u.5
for
4333998
osa-u.5
for
4332447
zma-u.5
for
103635958
zma-u.5
for
103643958
zma-u.5
for
103639290


Ortholog ID: 1022
Species ghi ghi ath ath bra bna bna cit cit gma gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae tae hvu hvu sbi sbi bdi bdi cre
Symbol LOC107932929 LOC107954443 ECA2 ECA4 LOC103871788 LOC106419981 LOC106419983 LOC127900968 LOC102610538 LOC100788807 LOC100812151 LOC100248326 LOC100266003 LOC7472652 LOC7486789 LOC11420948 LOC25489978 LOC101257236 LCA1 LOC102595434 LOC102605714 LOC107817505 LOC107814435 LOC4332447 LOC4333998 LOC100192002 LOC103643958 LOC123090984 LOC123180083 LOC123447668 LOC123448975 LOC8067356 LOC8060530 LOC100845328 LOC100840411 CHLRE_11g467795v5
Function* calcium-transporting ATPase 1, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type ER-type Ca2+-ATPase 2 endomembrane-type CA-ATPase 4 calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase, endoplasmic reticulum-type-like calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 1, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like Ca2+-ATPase calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase, endoplasmic reticulum-type-like calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type uncharacterized LOC100192002 calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type-like calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 3, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type calcium-transporting ATPase 4, endoplasmic reticulum-type uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03272 Virion - Hepatitis viruses 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath01200 Carbon metabolism 6
ath01230 Biosynthesis of amino acids 6
ath00010 Glycolysis / Gluconeogenesis 5
ath00710 Carbon fixation by Calvin cycle 3
ath00030 Pentose phosphate pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 15
ath04145 Phagosome 5
ath03060 Protein export 3
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 2
bra04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 2
gma00970 Aminoacyl-tRNA biosynthesis 2
gma00020 Citrate cycle (TCA cycle) 2
gma00785 Lipoic acid metabolism 2
gma01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi00510 N-Glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03013 Nucleocytoplasmic transport 3
vvi00280 Valine, leucine and isoleucine degradation 2
vvi00410 beta-Alanine metabolism 2
vvi00640 Propanoate metabolism 2
vvi01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03013 Nucleocytoplasmic transport 6
ppo03250 Viral life cycle - HIV-1 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04141 Protein processing in endoplasmic reticulum 5
ppo04626 Plant-pathogen interaction 3
ppo03040 Spliceosome 2
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 4
sot04144 Endocytosis 3
sot05100 Bacterial invasion of epithelial cells 3
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00250 Alanine, aspartate and glutamate metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03013 Nucleocytoplasmic transport 3
osa03018 RNA degradation 2
osa03015 mRNA surveillance pathway 2
osa04382 Cornified envelope formation 2
osa03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma01200 Carbon metabolism 7
zma00190 Oxidative phosphorylation 5
zma04145 Phagosome 5
zma00630 Glyoxylate and dicarboxylate metabolism 4
zma00071 Fatty acid degradation 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04148 Efferocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03083 Polycomb repressive complex 3
tae04120 Ubiquitin mediated proteolysis 3
tae04141 Protein processing in endoplasmic reticulum 3
tae03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 10
hvu03060 Protein export 3
hvu04144 Endocytosis 3
hvu04145 Phagosome 3
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 3
sbi04148 Efferocytosis 2
sbi04517 IgSF CAM signaling 2
sbi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04142 Lysosome 4
bdi04144 Endocytosis 3
bdi05100 Bacterial invasion of epithelial cells 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04016 MAPK signaling pathway - plant 3
bdi04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107932929 107954443 827984 837280 103871788 106419981 106419983 127900968 102610538 100788807 100812151 100248326 100266003 7472652 7486789 11420948 25489978 101257236 543554 102595434 102605714 107817505 107814435 4332447 4333998 100192002 103643958 123090984 123180083 123447668 123448975 8067356 8060530 100845328 100840411 5725079
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