ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107958933	reticulon-like protein B21
ghi-r.1	107888429	reticulon-like protein B21
ghi-r.1	107893431	reticulon-like protein B21
ghi-r.1	107901585	reticulon-like protein B21
ath-u.5	AT5G58000	Reticulon family protein
bra-r.6	103845237	reticulon-like protein B21
bra-r.6	103851671	reticulon-like protein B21
bna-r.1	106425992	reticulon-like protein B21
bna-r.1	106388477	reticulon-like protein B21
bna-r.1	106387728	reticulon-like protein B21
cit-r.1	102607778	reticulon-like protein B21
gma-u.5	100801188	reticulon-like protein B21
gma-u.5	100799847	reticulon-like protein B21
gma-u.5	100785568	reticulon-like protein B21
ppo-u.5	7485237	reticulon-like protein B21
mtr-u.5	25488376	reticulon-like protein B21
sly-u.5	101268551	reticulon-like protein B21
sly-u.5	101265346	reticulon-like protein B21
sot-r.1	102594008	reticulon-like protein B21
sot-r.1	102587880	reticulon-like protein B21
nta-r.1	107802707	uncharacterized LOC107802707
nta-r.1	107801524	uncharacterized LOC107801524
nta-r.1	107782384	uncharacterized LOC107782384
osa-u.5	4345164	reticulon-like protein B21
zma-u.5	103653363	reticulon-like protein B21
tae-r.2	123077897	reticulon-like protein B21
tae-r.2	123069399	reticulon-like protein B21
tae-r.2	123060824	reticulon-like protein B21
hvu-r.1	123443281	reticulon-like protein B21
sbi-r.1	8073074	reticulon-like protein B21
bdi-r.1	100842453	reticulon-like protein B21

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016750339.2 [sequence] [blastp]
XP_016750340.2 [sequence] [blastp]

Subcellular
localization
wolf

plas 4, nucl 2, cysk_plas 2, mito_plas 2, cyto_plas 2	(predict for XP_016750339.2)
plas 6, E.R. 2, nucl 1, E.R._vacu 1	(predict for XP_016750340.2)

Subcellular
localization
TargetP

other 7	(predict for XP_016750339.2)
other 7	(predict for XP_016750340.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107958933	ghi-r.1 for 107888429	ghi-r.1 for 107893431	ghi-r.1 for 107901585	ath-u.5 for AT5G58000	bra-r.6 for 103845237	bra-r.6 for 103851671	bna-r.1 for 106425992	bna-r.1 for 106388477	bna-r.1 for 106387728	cit-r.1 for 102607778	gma-u.5 for 100801188	gma-u.5 for 100799847	gma-u.5 for 100785568	ppo-u.5 for 7485237	mtr-u.5 for 25488376	sly-u.5 for 101268551	sly-u.5 for 101265346	sot-r.1 for 102594008	sot-r.1 for 102587880	nta-r.1 for 107802707	nta-r.1 for 107801524	nta-r.1 for 107782384	osa-u.5 for 4345164	zma-u.5 for 103653363	tae-r.2 for 123077897	tae-r.2 for 123069399	tae-r.2 for 123060824	hvu-r.1 for 123443281	sbi-r.1 for 8073074	bdi-r.1 for 100842453

Ortholog

Ortholog ID: 5599

Species

ghi

ath

bra

bna

cit

gma

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

reticulon-like protein B21

Reticulon family protein

reticulon-like protein B21

uncharacterized LOC107802707

uncharacterized LOC107801524

uncharacterized LOC107791236

reticulon-like protein B21

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04075	Plant hormone signal transduction	3
ghi04144	Endocytosis	2
ghi04517	IgSF CAM signaling	2
ghi05100	Bacterial invasion of epithelial cells	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	4
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	2
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00500	Starch and sucrose metabolism	2
gma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	8
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2
nta00511	Other glycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	7
nta00520	Amino sugar and nucleotide sugar metabolism	2
nta01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00520	Amino sugar and nucleotide sugar metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00940	Phenylpropanoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00270	Cysteine and methionine metabolism	5
sbi00670	One carbon pool by folate	5
sbi01230	Biosynthesis of amino acids	5
sbi01240	Biosynthesis of cofactors	3
sbi00999	Biosynthesis of various plant secondary metabolites	2

Expression

Expression pattern

Entrez Gene ID^*

107888429

107906905

121218313

835911

103845237

103851671

106425992

106387728

106371572

102607778

100801188

100799847

100785568

7485237

25488376

101268551

101265346

102594008

102587880

107802707

107801524

107791236

4345164

103653363

123077897

123069399

123060824

123443281

8073074

100842453

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107958933 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958933 (ghi-r.1 coexpression data)


Species	ghi	ath	bra	bna	cit	gma	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	vvi	cre
Paralog	4	1	2	3	1	3	1	1	2	2	3	1	1	3	1	1	1	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107958933 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107958933 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**