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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107958937   F-box protein SKIP1 
 ghi-r.1   107906899   F-box protein SKIP1 
 ath-u.5   SKIP1   SKP1 interacting partner 1 
 bra-r.6   103845227   F-box protein SKIP1 
 bna-r.1   106371565   F-box protein SKIP1-like 
 bna-r.1   106426086   F-box protein SKIP1-like 
 bna-r.1   106441098   putative F-box/LRR-repeat protein 19 
 cit-r.1   102613256   F-box protein SKIP1-like 
 gma-u.5   100787875   F-box protein SKIP1 
 vvi-u.5   100257095   F-box protein SKIP1 
 ppo-u.5   7489437   F-box protein SKIP1 
 mtr-u.5   11444176   F-box protein SKIP1 
 sot-r.1   102582484   F-box protein SKIP1 
 nta-r.1   107768364   F-box protein SKIP1-like 
 nta-r.1   107804509   F-box protein SKIP1-like 
 osa-u.5   4345135   F-box protein SKIP1 
 tae-r.2   123188571   F-box protein SKIP1 
 tae-r.2   123180148   F-box protein SKIP1 
 tae-r.2   123107064   F-box protein SKIP1 
 hvu-r.1   123402824   F-box protein SKIP1-like 
 sbi-r.1   8067972   F-box protein SKIP1 

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Top 50 coexpressed genes to 107958937 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107958937 (ghi-r.1 coexpression data)

CoexMap"107958937"


ghiLOC107958937 | Entrez gene ID : 107958937    
Species ghi ath bra bna cit gma vvi ppo mtr sot nta osa tae hvu sbi bdi sly zma cre
Paralog 2 1 1 3 1 1 1 1 1 1 2 1 3 1 1 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0031146 [list] [network] SCF-dependent proteasomal ubiquitin-dependent protein catabolic process  (153 genes)  IEA  
GO CC
GO:0019005 [list] [network] SCF ubiquitin ligase complex  (155 genes)  IEA  
GO MF
Protein XP_016750344.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  nucl 4,  chlo 1,  extr 1  (predict for XP_016750344.1)
Subcellular
localization
TargetP
other 9  (predict for XP_016750344.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107958937
ghi-r.1
for
107906899
ath-u.5
for
SKIP1
bra-r.6
for
103845227
bna-r.1
for
106371565
bna-r.1
for
106426086
bna-r.1
for
106441098
cit-r.1
for
102613256
gma-u.5
for
100787875
vvi-u.5
for
100257095
ppo-u.5
for
7489437
mtr-u.5
for
11444176
sot-r.1
for
102582484
nta-r.1
for
107768364
nta-r.1
for
107804509
osa-u.5
for
4345135
tae-r.2
for
123188571
tae-r.2
for
123180148
tae-r.2
for
123107064
hvu-r.1
for
123402824
sbi-r.1
for
8067972


Ortholog ID: 11450
Species ghi ghi ath bra bna bna bna cit gma vvi ppo mtr sot nta nta osa tae tae tae hvu sbi
Symbol LOC107958937 LOC107906899 SKIP1 LOC103845227 LOC106426086 LOC106441098 LOC106444758 LOC102613256 LOC100787875 LOC100257095 LOC7489437 LOC11444176 LOC102582484 LOC107768364 LOC107804509 LOC4345135 LOC123188571 LOC123180148 LOC123107064 LOC123402824 LOC8067972
Function* F-box protein SKIP1 F-box protein SKIP1 SKP1 interacting partner 1 F-box protein SKIP1 F-box protein SKIP1-like putative F-box/LRR-repeat protein 19 putative F-box/LRR-repeat protein 19 F-box protein SKIP1-like F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1-like F-box protein SKIP1-like F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1 F-box protein SKIP1-like F-box protein SKIP1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 8
bna04075 Plant hormone signal transduction 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00380 Tryptophan metabolism 5
bna00480 Glutathione metabolism 4
bna00520 Amino sugar and nucleotide sugar metabolism 3
bna00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
cit04120 Ubiquitin mediated proteolysis 2
cit04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00500 Starch and sucrose metabolism 2
ppo00280 Valine, leucine and isoleucine degradation 2
ppo01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00360 Phenylalanine metabolism 2
mtr00650 Butanoate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 2
sot00510 N-Glycan biosynthesis 2
sot00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00052 Galactose metabolism 2
nta00520 Amino sugar and nucleotide sugar metabolism 2
nta01250 Biosynthesis of nucleotide sugars 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00860 Porphyrin metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03020 RNA polymerase 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107958937 107906899 835901 103845227 106426086 106441098 106444758 102613256 100787875 100257095 7489437 11444176 102582484 107768364 107804509 4345135 123188571 123180148 123107064 123402824 8067972
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