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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959396   24-methylenesterol C-methyltransferase 2-like 
 ghi-r.1   107905551   24-methylenesterol C-methyltransferase 2-like 
 ghi-r.1   107904984   24-methylenesterol C-methyltransferase 2 
 ghi-r.1   107937575   24-methylenesterol C-methyltransferase 2 
 ath-u.5   SMT2   sterol methyltransferase 2 
 ath-u.5   SMT3   sterol methyltransferase 3 
 bra-r.6   117125925   24-methylenesterol C-methyltransferase 2 
 bra-r.6   103832055   24-methylenesterol C-methyltransferase 3 
 bra-r.6   108870355   24-methylenesterol C-methyltransferase 2 
 bna-r.1   106433699   24-methylenesterol C-methyltransferase 2-like 
 bna-r.1   106421679   24-methylenesterol C-methyltransferase 3-like 
 bna-r.1   106347090   24-methylenesterol C-methyltransferase 2 
 cit-r.1   102622046   24-methylenesterol C-methyltransferase 2 
 gma-u.5   SMT2-2   24-methylenesterol C-methyltransferase 2-2 
 gma-u.5   SMT2-1   sterol 24-C methyltransferase 2-1 
 vvi-u.5   100262458   24-methylenesterol C-methyltransferase 2 
 vvi-u.5   100254003   24-methylenesterol C-methyltransferase 2 
 ppo-u.5   7494000   24-methylenesterol C-methyltransferase 2 
 ppo-u.5   7490620   24-methylenesterol C-methyltransferase 2 
 mtr-u.5   11436684   24-methylenesterol C-methyltransferase 2 
 sly-u.5   101243835   24-methylenesterol C-methyltransferase 2 
 sly-u.5   101247376   24-methylenesterol C-methyltransferase 2 
 sot-r.1   102596628   24-methylenesterol C-methyltransferase 2-like 
 sot-r.1   102589166   24-methylenesterol C-methyltransferase 2-like 
 nta-r.1   107821329   24-methylenesterol C-methyltransferase 2-like 
 nta-r.1   107800100   24-methylenesterol C-methyltransferase 2-like 
 nta-r.1   107765415   24-methylenesterol C-methyltransferase 2 
 osa-u.5   4331540   24-methylenesterol C-methyltransferase 2-like 
 zma-u.5   100192647   sterol methyl transferase 2 
 zma-u.5   100282753   24-methylenesterol C-methyltransferase 2 
 tae-r.2   123093657   24-methylenesterol C-methyltransferase 2 
 tae-r.2   123127363   24-methylenesterol C-methyltransferase 2 
 tae-r.2   123105856   24-methylenesterol C-methyltransferase 2 
 hvu-r.1   123449744   24-methylenesterol C-methyltransferase 2 
 hvu-r.1   123411259   24-methylenesterol C-methyltransferase 2-like 
 sbi-r.1   8057407   24-methylenesterol C-methyltransferase 2 
 bdi-r.1   100830846   24-methylenesterol C-methyltransferase 2 
 bdi-r.1   100845021   24-methylenesterol C-methyltransferase 2 
 cre-r.1   CHLRE_12g500500v5   uncharacterized protein 

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Top 50 coexpressed genes to 107959396 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959396 (ghi-r.1 coexpression data)

CoexMap"107959396"


ghiLOC107959396 | Entrez gene ID : 107959396    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 2 2 1 2 2 3 1 2 3 2 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00100 [list] [network] Steroid biosynthesis (86 genes)
GO BP
GO:0006694 [list] [network] steroid biosynthetic process  (143 genes)  IEA  
GO CC
GO MF
GO:0008757 [list] [network] S-adenosylmethionine-dependent methyltransferase activity  (451 genes)  IEA  
Protein NP_001314620.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  E.R._vacu 1,  vacu 1,  E.R. 1  (predict for NP_001314620.1)
Subcellular
localization
TargetP
scret 6,  other 3  (predict for NP_001314620.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959396
ghi-r.1
for
107905551
ghi-r.1
for
107904984
ghi-r.1
for
107937575
ath-u.5
for
SMT2
ath-u.5
for
SMT3
bra-r.6
for
117125925
bra-r.6
for
103832055
bra-r.6
for
108870355
bna-r.1
for
106433699
bna-r.1
for
106421679
bna-r.1
for
106347090
cit-r.1
for
102622046
gma-u.5
for
SMT2-2
gma-u.5
for
SMT2-1
vvi-u.5
for
100262458
vvi-u.5
for
100254003
ppo-u.5
for
7494000
ppo-u.5
for
7490620
mtr-u.5
for
11436684
sly-u.5
for
101243835
sly-u.5
for
101247376
sot-r.1
for
102596628
sot-r.1
for
102589166
nta-r.1
for
107821329
nta-r.1
for
107800100
nta-r.1
for
107765415
osa-u.5
for
4331540
zma-u.5
for
100192647
zma-u.5
for
100282753
tae-r.2
for
123093657
tae-r.2
for
123127363
tae-r.2
for
123105856
hvu-r.1
for
123449744
hvu-r.1
for
123411259
sbi-r.1
for
8057407
bdi-r.1
for
100830846
bdi-r.1
for
100845021
cre-r.1
for
CHLRE_12g500500v5


Ortholog ID: 3746
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi vvi ppo ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu hvu sbi bdi bdi cre
Symbol LOC107959396 LOC107905551 LOC107937575 SMT2 SMT3 LOC117125925 LOC103832055 LOC108870355 LOC106347090 LOC106347091 LOC106406523 LOC102622046 SMT2-2 SMT2-1 LOC100262458 LOC100254003 LOC7494000 LOC7490620 LOC11436684 LOC101243835 LOC101247376 LOC102596628 LOC102589166 LOC107821329 LOC107800100 LOC107764502 LOC4331540 LOC100192647 LOC100282753 LOC123127363 LOC123105856 LOC123098913 LOC123449744 LOC123411259 LOC8057407 LOC100830846 LOC100845021 CHLRE_12g500500v5
Function* 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2 sterol methyltransferase 2 sterol methyltransferase 3 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 3 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 3 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2-2 sterol 24-C methyltransferase 2-1 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2-like sterol methyl transferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2-like 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 24-methylenesterol C-methyltransferase 2 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00520 Amino sugar and nucleotide sugar metabolism 3
bra01250 Biosynthesis of nucleotide sugars 3
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00100 Steroid biosynthesis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00020 Citrate cycle (TCA cycle) 4
bna01200 Carbon metabolism 4
bna01210 2-Oxocarboxylic acid metabolism 4
bna01230 Biosynthesis of amino acids 4
bna00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04145 Phagosome 4
cit04517 IgSF CAM signaling 4
cit04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03010 Ribosome 7
gma00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00541 Biosynthesis of various nucleotide sugars 3
gma01250 Biosynthesis of nucleotide sugars 3
gma00940 Phenylpropanoid biosynthesis 2
gma00100 Steroid biosynthesis 2
gma00051 Fructose and mannose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi01250 Biosynthesis of nucleotide sugars 3
vvi00520 Amino sugar and nucleotide sugar metabolism 2
vvi00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 3
ppo04517 IgSF CAM signaling 3
ppo04814 Motor proteins 3
ppo00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00750 Vitamin B6 metabolism 4
sly01240 Biosynthesis of cofactors 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04145 Phagosome 3
sot04517 IgSF CAM signaling 3
sot04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04142 Lysosome 3
sot00520 Amino sugar and nucleotide sugar metabolism 2
sot04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 3
zma00100 Steroid biosynthesis 2
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00100 Steroid biosynthesis 2
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03082 ATP-dependent chromatin remodeling 9
tae00100 Steroid biosynthesis 3
tae00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00100 Steroid biosynthesis 3
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00562 Inositol phosphate metabolism 3
tae04070 Phosphatidylinositol signaling system 3
tae00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01230 Biosynthesis of amino acids 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04814 Motor proteins 6
hvu04145 Phagosome 5
hvu04517 IgSF CAM signaling 4
hvu04141 Protein processing in endoplasmic reticulum 2
hvu00520 Amino sugar and nucleotide sugar metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi00100 Steroid biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00100 Steroid biosynthesis 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959396 107905551 107937575 838621 843941 117125925 103832055 108870355 106347090 106347091 106406523 102622046 100791154 100804517 100262458 100254003 7494000 7490620 11436684 101243835 101247376 102596628 102589166 107821329 107800100 107764502 4331540 100192647 100282753 123127363 123105856 123098913 123449744 123411259 8057407 100830846 100845021 5716379
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