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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107959910   proteasome subunit beta type-7-B 
 ghi-r.1   107925972   proteasome subunit beta type-7-B 
 ghi-r.1   107926516   proteasome subunit beta type-7-A 
 ghi-r.1   107926569   proteasome subunit beta type-7-A 
 ath-u.5   PBB1   N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 
 ath-u.5   PBB2   20S proteasome beta subunit PBB2 
 bra-r.6   103875216   proteasome subunit beta type-7-A 
 bra-r.6   103854234   proteasome subunit beta type-7-A 
 bna-r.1   125589741   proteasome subunit beta type-7-A 
 bna-r.1   106401825   proteasome subunit beta type-7-A 
 bna-r.1   106349255   proteasome subunit beta type-7-A 
 cit-r.1   102606721   proteasome subunit beta type-7-B 
 cit-r.1   102624622   proteasome subunit beta type-7-A 
 gma-u.5   100819784   proteasome subunit beta type-7-B 
 gma-u.5   100808133   proteasome subunit beta type-7-B 
 vvi-u.5   100249199   proteasome subunit beta type-7-A 
 ppo-u.5   7470180   proteasome subunit beta type-7-A 
 ppo-u.5   7496649   proteasome subunit beta type-7-B 
 mtr-u.5   11442392   proteasome subunit beta type-7-B 
 mtr-u.5   11426050   proteasome subunit beta type-7-B 
 sly-u.5   101251571   proteasome subunit beta type-7-A 
 sly-u.5   101248875   proteasome subunit beta type-7-A 
 sot-r.1   102603340   proteasome subunit beta type-7-A 
 nta-r.1   107762226   proteasome subunit beta type-7-A 
 nta-r.1   107830087   proteasome subunit beta type-7-B-like 
 nta-r.1   107787670   proteasome subunit beta type-7-A 
 osa-u.5   4338009   proteasome subunit beta type-7-A 
 zma-u.5   100283485   uncharacterized LOC100283485 
 zma-u.5   100216834   uncharacterized LOC100216834 
 tae-r.2   123115313   proteasome subunit beta type-7-B 
 tae-r.2   123041214   proteasome subunit beta type-7-B 
 tae-r.2   123180733   proteasome subunit beta type-7-B 
 hvu-r.1   123427301   proteasome subunit beta type-7-B-like 
 sbi-r.1   8066887   proteasome subunit beta type-7-A 
 sbi-r.1   8069144   proteasome subunit beta type-7-A 
 bdi-r.1   100839896   proteasome subunit beta type-7-A 
 bdi-r.1   100832453   proteasome subunit beta type-7-B 
 cre-r.1   CHLRE_10g424400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107959910 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107959910 (ghi-r.1 coexpression data)

CoexMap"107959910"


ghiLOC107959910 | Entrez gene ID : 107959910    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 2 3 2 2 1 2 2 2 1 3 1 2 3 1 2 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03050 [list] [network] Proteasome (162 genes)
GO BP
GO:0051603 [list] [network] proteolysis involved in protein catabolic process  (1058 genes)  IEA  
GO CC
GO:0005839 [list] [network] proteasome core complex  (69 genes)  IEA  
GO MF
GO:0004298 [list] [network] threonine-type endopeptidase activity  (18 genes)  IEA  
Protein XP_040970153.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 6,  mito 1,  plas 1,  pero 1,  cysk 1,  golg 1,  golg_plas 1,  cysk_plas 1,  mito_plas 1  (predict for XP_040970153.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040970153.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107959910
ghi-r.1
for
107925972
ghi-r.1
for
107926516
ghi-r.1
for
107926569
ath-u.5
for
PBB1
ath-u.5
for
PBB2
bra-r.6
for
103875216
bra-r.6
for
103854234
bna-r.1
for
125589741
bna-r.1
for
106401825
bna-r.1
for
106349255
cit-r.1
for
102606721
cit-r.1
for
102624622
gma-u.5
for
100819784
gma-u.5
for
100808133
vvi-u.5
for
100249199
ppo-u.5
for
7470180
ppo-u.5
for
7496649
mtr-u.5
for
11442392
mtr-u.5
for
11426050
sly-u.5
for
101251571
sly-u.5
for
101248875
sot-r.1
for
102603340
nta-r.1
for
107762226
nta-r.1
for
107830087
nta-r.1
for
107787670
osa-u.5
for
4338009
zma-u.5
for
100283485
zma-u.5
for
100216834
tae-r.2
for
123115313
tae-r.2
for
123041214
tae-r.2
for
123180733
hvu-r.1
for
123427301
sbi-r.1
for
8066887
sbi-r.1
for
8069144
bdi-r.1
for
100839896
bdi-r.1
for
100832453
cre-r.1
for
CHLRE_10g424400v5


Ortholog ID: 4737
Species ghi ghi ghi ath ath bra bra bna bna bna cit cit gma gma vvi ppo ppo mtr mtr sly sly sot nta nta nta osa zma zma tae tae tae hvu sbi sbi bdi bdi cre
Symbol LOC107959910 LOC107925972 LOC107926569 PBB1 PBB2 LOC103875216 LOC103854234 LOC106401825 LOC106349255 LOC125597779 LOC102606721 LOC102624622 LOC100819784 LOC100808133 LOC100249199 LOC7470180 LOC7496649 LOC11442392 LOC11426050 LOC101251571 LOC101248875 LOC102603340 LOC107762226 LOC107778362 LOC107777055 LOC4338009 LOC100283485 LOC100216834 LOC123115313 LOC123041214 LOC123180733 LOC123427301 LOC8066887 LOC8069144 LOC100839896 LOC100832453 CHLRE_10g424400v5
Function* proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-A N-terminal nucleophile aminohydrolases (Ntn hydrolases) superfamily protein 20S proteasome beta subunit PBB2 proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A-like proteasome subunit beta type-7-B proteasome subunit beta type-7-A proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A uncharacterized LOC100283485 uncharacterized LOC100216834 proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-B proteasome subunit beta type-7-B-like proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-A proteasome subunit beta type-7-B uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 9
ghi03018 RNA degradation 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 9
ghi03018 RNA degradation 2
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03050 Proteasome 12
ghi00220 Arginine biosynthesis 2
ghi01210 2-Oxocarboxylic acid metabolism 2
ghi01230 Biosynthesis of amino acids 2
ghi03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03050 Proteasome 19
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 11
cit00190 Oxidative phosphorylation 3
cit01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03050 Proteasome 12
cit04141 Protein processing in endoplasmic reticulum 3
cit00510 N-Glycan biosynthesis 2
cit00513 Various types of N-glycan biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 14
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03050 Proteasome 13
gma03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 9
ppo04141 Protein processing in endoplasmic reticulum 2
ppo03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 11
mtr04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03050 Proteasome 10
mtr03008 Ribosome biogenesis in eukaryotes 3
mtr03013 Nucleocytoplasmic transport 3
mtr03250 Viral life cycle - HIV-1 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03050 Proteasome 14
sot00190 Oxidative phosphorylation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00190 Oxidative phosphorylation 5
nta03050 Proteasome 5
nta00350 Tyrosine metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03050 Proteasome 10
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03050 Proteasome 17
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 18
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03050 Proteasome 15
zma03018 RNA degradation 2
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04141 Protein processing in endoplasmic reticulum 4
tae00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 18
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03050 Proteasome 10
tae04141 Protein processing in endoplasmic reticulum 2
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03050 Proteasome 18
hvu01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 11
sbi03440 Homologous recombination 2
sbi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03050 Proteasome 12
sbi04141 Protein processing in endoplasmic reticulum 3
sbi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03050 Proteasome 15
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03050 Proteasome 19
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107959910 107925972 107926569 822364 834056 103875216 103854234 106401825 106349255 125597779 102606721 102624622 100819784 100808133 100249199 7470180 7496649 11442392 11426050 101251571 101248875 102603340 107762226 107778362 107777055 4338009 100283485 100216834 123115313 123041214 123180733 123427301 8066887 8069144 100839896 100832453 5728211
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