ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107960437	uncharacterized LOC107960437
ghi-r.1	107933797	uncharacterized LOC107933797
ghi-r.1	107887412	uncharacterized LOC107887412
ghi-r.1	121206208	uncharacterized LOC121206208
ath-u.5	AT2G42760	DUF1685 family protein
bra-r.6	103865963	uncharacterized LOC103865963
bna-r.1	111211976	uncharacterized LOC111211976
bna-r.1	BNAA09G54110D	uncharacterized BNAA09G54110D
bna-r.1	106398085	uncharacterized LOC106398085
cit-r.1	102612278	uncharacterized LOC102612278
cit-r.1	102628675	hypothetical protein
cit-r.1	107175629	hypothetical protein
gma-u.5	100800312	uncharacterized LOC100800312
gma-u.5	100792716	uncharacterized LOC100792716
gma-u.5	100786645	uncharacterized LOC100786645
vvi-u.5	100260838	uncharacterized LOC100260838
vvi-u.5	100266883	uncharacterized LOC100266883
vvi-u.5	100257151	uncharacterized LOC100257151
ppo-u.5	7476327	uncharacterized LOC7476327
ppo-u.5	18100213	uncharacterized LOC18100213
ppo-u.5	7463821	uncharacterized LOC7463821
mtr-u.5	11407945	uncharacterized LOC11407945
mtr-u.5	11417998	uncharacterized LOC11417998
mtr-u.5	11445670	uncharacterized LOC11445670
sly-u.5	101267910	uncharacterized LOC101267910
sly-u.5	101249595	uncharacterized LOC101249595
sly-u.5	104646046	uncharacterized LOC104646046
sot-r.1	102578884	uncharacterized LOC102578884
sot-r.1	107061093	uncharacterized LOC107061093
sot-r.1	107061418	uncharacterized LOC107061418
nta-r.1	107785579	uncharacterized LOC107785579
nta-r.1	107785729	uncharacterized LOC107785729
nta-r.1	107824209	uncharacterized LOC107824209
osa-u.5	4341263	uncharacterized LOC4341263
zma-u.5	118473361	uncharacterized LOC118473361
zma-u.5	103638601	uncharacterized LOC103638601
tae-r.2	123165705	translation initiation factor IF-2
tae-r.2	123151657	translation initiation factor IF-2
tae-r.2	123157792	translation initiation factor IF-2
hvu-r.1	123408926	uncharacterized LOC123408926
sbi-r.1	110430814	uncharacterized LOC110430814
bdi-r.1	100825390	uncharacterized LOC100825390

Top 50 coexpressed genes to 107960437 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107960437 (ghi-r.1 coexpression data)

CoexMap"107960437"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_016752277.2 [sequence] [blastp]

Subcellular
localization
wolf

nucl 9

(predict for XP_016752277.2)

Subcellular
localization
TargetP

chlo 5, other 5

(predict for XP_016752277.2)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107960437	ghi-r.1 for 107933797	ghi-r.1 for 107887412	ghi-r.1 for 121206208	ath-u.5 for AT2G42760	bra-r.6 for 103865963	bna-r.1 for 111211976	bna-r.1 for BNAA09G54110D	bna-r.1 for 106398085	cit-r.1 for 102612278	cit-r.1 for 102628675	cit-r.1 for 107175629	gma-u.5 for 100800312	gma-u.5 for 100792716	gma-u.5 for 100786645	vvi-u.5 for 100260838	vvi-u.5 for 100266883	vvi-u.5 for 100257151	ppo-u.5 for 7476327	ppo-u.5 for 18100213	ppo-u.5 for 7463821	mtr-u.5 for 11407945	mtr-u.5 for 11417998	mtr-u.5 for 11445670	sly-u.5 for 101267910	sly-u.5 for 101249595	sly-u.5 for 104646046	sot-r.1 for 102578884	sot-r.1 for 107061093	sot-r.1 for 107061418	nta-r.1 for 107785579	nta-r.1 for 107785729	nta-r.1 for 107824209	osa-u.5 for 4341263	zma-u.5 for 118473361	zma-u.5 for 103638601	tae-r.2 for 123165705	tae-r.2 for 123151657	tae-r.2 for 123157792	hvu-r.1 for 123408926	sbi-r.1 for 110430814	bdi-r.1 for 100825390

Ortholog

Ortholog ID: 2214

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized LOC107899657

uncharacterized LOC107905823

nucleolin

DUF1685 family protein

uncharacterized LOC103865963

uncharacterized BNAA09G54110D

uncharacterized LOC106398085

uncharacterized LOC106450327

uncharacterized LOC102612278

hypothetical protein

uncharacterized LOC100800312

uncharacterized LOC100814411

uncharacterized LOC100782674

uncharacterized LOC100257151

uncharacterized LOC100854914

uncharacterized LOC7476327

uncharacterized LOC18100213

uncharacterized LOC7463821

uncharacterized LOC11407945

uncharacterized LOC11417998

uncharacterized LOC11445670

uncharacterized LOC101249595

uncharacterized LOC104646046

uncharacterized LOC104646047

uncharacterized LOC102578884

uncharacterized LOC107061093

uncharacterized LOC107061418

uncharacterized LOC107785579

uncharacterized LOC107785729

uncharacterized LOC107824209

uncharacterized LOC4341263

uncharacterized LOC118473361

uncharacterized LOC103638601

translation initiation factor IF-2

uncharacterized LOC123408926

uncharacterized LOC110430814

uncharacterized LOC100825390

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi04016	MAPK signaling pathway - plant	3
ghi04070	Phosphatidylinositol signaling system	3
ghi04075	Plant hormone signal transduction	3
ghi04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04075	Plant hormone signal transduction	6
ath00592	alpha-Linolenic acid metabolism	4
ath00591	Linoleic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00592	alpha-Linolenic acid metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00908	Zeatin biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04075	Plant hormone signal transduction	2
vvi00906	Carotenoid biosynthesis	2
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00040	Pentose and glucuronate interconversions	3
mtr00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	7
sly04016	MAPK signaling pathway - plant	4
sly00940	Phenylpropanoid biosynthesis	2
sly00941	Flavonoid biosynthesis	2
sly00945	Stilbenoid, diarylheptanoid and gingerol biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04016	MAPK signaling pathway - plant	4
sly04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	7
sot04075	Plant hormone signal transduction	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3
nta03083	Polycomb repressive complex	2
nta04120	Ubiquitin mediated proteolysis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03083	Polycomb repressive complex	4
nta04120	Ubiquitin mediated proteolysis	4
nta04141	Protein processing in endoplasmic reticulum	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04075	Plant hormone signal transduction	4
nta00564	Glycerophospholipid metabolism	2
nta04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	3
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00100	Steroid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04626	Plant-pathogen interaction	4
hvu04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04016	MAPK signaling pathway - plant	6
sbi04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04075	Plant hormone signal transduction	6
bdi00592	alpha-Linolenic acid metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107899657

107905823

107901701

818876

103865963

106363261

106398085

106450327

102612278

102628675

107175629

100800312

100814411

100782674

100257151

100854914

7476327

18100213

7463821

11407945

11417998

11445670

101249595

104646046

104646047

102578884

107061093

107061418

107785579

107785729

107824209

4341263

118473361

103638601

123165705

123151657

123157792

123408926

110430814

100825390

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	1	1	3	3	3	3	3	3	3	3	3	1	2	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107960437 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107960437 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**