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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107961739   chorismate mutase 2 
 ath-u.5   AT4G31805   WRKY family transcription factor 
 gma-u.5   102667044   protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 
 gma-u.5   100795319   protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 
 vvi-u.5   100853784   protein POLAR-like 1 
 ppo-u.5   7458418   protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 
 mtr-u.5   11426747   protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 
 osa-u.5   4341675   protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION 
 zma-u.5   100280405   uncharacterized LOC100280405 

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Top 50 coexpressed genes to 107961739 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107961739 (ghi-r.1 coexpression data)

CoexMap"107961739"


ghiLOC107961739 | Entrez gene ID : 107961739    
Species ghi ath gma vvi ppo mtr osa zma sot hvu tae cit sbi sly cre bna nta bdi bra
Paralog 1 1 2 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi00400 [list] [network] Phenylalanine, tyrosine and tryptophan biosynthesis (103 genes)
ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)
GO BP
GO:0046417 [list] [network] chorismate metabolic process  (26 genes)  IEA  
GO:0009073 [list] [network] aromatic amino acid family biosynthetic process  (98 genes)  IEA  
GO CC
GO:0005737 [list] [network] cytoplasm  (13864 genes)  IEA  
GO MF
GO:0004106 [list] [network] chorismate mutase activity  (10 genes)  IEA  
Protein XP_016753321.1 [sequence] [blastp]
XP_016753322.1 [sequence] [blastp]
XP_040971774.1 [sequence] [blastp]
XP_040971775.1 [sequence] [blastp]
XP_040971776.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 7,  chlo 3  (predict for XP_016753321.1)
cyto 7,  chlo 3  (predict for XP_016753322.1)
chlo 5,  nucl 2,  mito 1,  cyto_mito 1  (predict for XP_040971774.1)
chlo 5,  nucl 2,  mito 1,  cyto_mito 1  (predict for XP_040971775.1)
cyto 7,  chlo 3  (predict for XP_040971776.1)
Subcellular
localization
TargetP
other 7  (predict for XP_016753321.1)
other 7  (predict for XP_016753322.1)
other 3,  mito 3,  chlo 3  (predict for XP_040971774.1)
other 3,  mito 3,  chlo 3  (predict for XP_040971775.1)
other 7  (predict for XP_040971776.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107961739

.
ath-u.5
for
AT4G31805

.
gma-u.5
for
102667044

.
gma-u.5
for
100795319

.
vvi-u.5
for
100853784

.
ppo-u.5
for
7458418

.
mtr-u.5
for
11426747

.
osa-u.5
for
4341675

.
zma-u.5
for
100280405

.


Ortholog ID: 4114
Species ath gma gma osa zma bra vvi ppo mtr ghi ghi cit bdi nta
Symbol AT4G31805 LOC102667044 LOC100795319 LOC4341675 LOC100280405 LOC103862085 LOC100853784 LOC7458418 LOC11426747 LOC107906824 LOC107961739 LOC102627858 LOC100827179 LOC107804516
Function* WRKY family transcription factor protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION uncharacterized LOC100280405 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR-like 1 protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION chorismate mutase 2 hypothetical protein protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION protein POLAR LOCALIZATION DURING ASYMMETRIC DIVISION AND REDISTRIBUTION
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03082 ATP-dependent chromatin remodeling 2
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04016 MAPK signaling pathway - plant 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04016 MAPK signaling pathway - plant 2
bra00073 Cutin, suberine and wax biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 5
vvi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 7
ppo03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00630 Glyoxylate and dicarboxylate metabolism 3
nta01200 Carbon metabolism 3
nta04146 Peroxisome 3
nta00240 Pyrimidine metabolism 2
nta01232 Nucleotide metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 829309 102667044 100795319 4341675 100280405 103862085 100853784 7458418 11426747 107906824 107961739 102627858 100827179 107804516
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