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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107961837   ubiquitin-conjugating enzyme E2 34 
 ghi-r.1   107913834   ubiquitin-conjugating enzyme E2 34 
 ghi-r.1   107897670   ubiquitin-conjugating enzyme E2 34 
 ghi-r.1   107897464   ubiquitin-conjugating enzyme E2 34 
 ath-u.5   UBC33   ubiquitin-conjugating enzyme 33 
 ath-u.5   UBC34   ubiquitin-conjugating enzyme 34 
 bra-r.6   103842801   ubiquitin-conjugating enzyme E2 34 
 bra-r.6   103872515   ubiquitin-conjugating enzyme E2 34 
 bra-r.6   103835962   ubiquitin-conjugating enzyme E2 34 
 bna-r.1   106434915   ubiquitin-conjugating enzyme E2 34-like 
 bna-r.1   106346702   ubiquitin-conjugating enzyme E2 34 
 bna-r.1   106387617   ubiquitin-conjugating enzyme E2 34 
 cit-r.1   102618560   ubiquitin-conjugating enzyme E2 34 
 gma-u.5   100778181   ubiquitin-conjugating enzyme E2 34 
 gma-u.5   100789952   ubiquitin-conjugating enzyme E2 34-like 
 vvi-u.5   100261654   ubiquitin-conjugating enzyme E2 34 
 ppo-u.5   18094665   ubiquitin-conjugating enzyme E2 34 
 mtr-u.5   11443912   ubiquitin-conjugating enzyme E2 34 
 sly-u.5   101248401   ubiquitin-conjugating enzyme E2 34 
 sly-u.5   543683   ubiquitin conjugating enzyme 2 
 sot-r.1   102601750   ubiquitin-conjugating enzyme E2 34-like 
 sot-r.1   102586223   ubiquitin-conjugating enzyme E2 34-like 
 nta-r.1   107790696   ubiquitin-conjugating enzyme E2 34 
 nta-r.1   107775245   ubiquitin-conjugating enzyme E2 34 
 nta-r.1   107762511   ubiquitin-conjugating enzyme E2 34 
 osa-u.5   4340379   ubiquitin-conjugating enzyme E2 34 
 zma-u.5   100193789   uncharacterized LOC100193789 
 zma-u.5   100283253   ubiquitin-conjugating enzyme E2 J2 
 tae-r.2   123164232   ubiquitin-conjugating enzyme E2 34 
 tae-r.2   123155856   ubiquitin-conjugating enzyme E2 34 
 tae-r.2   123147956   ubiquitin-conjugating enzyme E2 34 
 hvu-r.1   123407474   ubiquitin-conjugating enzyme E2 34-like 
 sbi-r.1   8077294   ubiquitin-conjugating enzyme E2 34 
 bdi-r.1   100842016   ubiquitin-conjugating enzyme E2 34 
 cre-r.1   CHLRE_08g372400v5   uncharacterized protein 

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Top 50 coexpressed genes to 107961837 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107961837 (ghi-r.1 coexpression data)

CoexMap"107961837"


ghiLOC107961837 | Entrez gene ID : 107961837    
Species ghi ath bra bna cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 4 2 3 3 1 2 1 1 1 2 2 3 1 2 3 1 1 1 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04120 [list] [network] Ubiquitin mediated proteolysis (368 genes)
ghi04141 [list] [network] Protein processing in endoplasmic reticulum (593 genes)
GO BP
GO CC
GO MF
Protein XP_016753491.1 [sequence] [blastp]
XP_016753492.1 [sequence] [blastp]
XP_040971552.1 [sequence] [blastp]
XP_040971553.1 [sequence] [blastp]
XP_040971554.1 [sequence] [blastp]
Subcellular
localization
wolf
golg 4,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_016753491.1)
golg 4,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_016753492.1)
golg 4,  nucl 3,  cyto 1,  cysk_nucl 1  (predict for XP_040971552.1)
golg 4,  plas 2,  chlo 1,  cyto 1,  E.R._plas 1  (predict for XP_040971553.1)
golg 4,  plas 2,  chlo 1,  cyto 1,  E.R._plas 1  (predict for XP_040971554.1)
Subcellular
localization
TargetP
other 6,  mito 4  (predict for XP_016753491.1)
other 6,  mito 4  (predict for XP_016753492.1)
other 6,  mito 4  (predict for XP_040971552.1)
other 5,  mito 3  (predict for XP_040971553.1)
other 5,  mito 3  (predict for XP_040971554.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107961837
ghi-r.1
for
107913834
ghi-r.1
for
107897670
ghi-r.1
for
107897464
ath-u.5
for
UBC33
ath-u.5
for
UBC34
bra-r.6
for
103842801
bra-r.6
for
103872515
bra-r.6
for
103835962
bna-r.1
for
106434915
bna-r.1
for
106346702
bna-r.1
for
106387617
cit-r.1
for
102618560
gma-u.5
for
100778181
gma-u.5
for
100789952
vvi-u.5
for
100261654
ppo-u.5
for
18094665
mtr-u.5
for
11443912
sly-u.5
for
101248401
sly-u.5
for
543683
sot-r.1
for
102601750
sot-r.1
for
102586223
nta-r.1
for
107790696
nta-r.1
for
107775245
nta-r.1
for
107762511
osa-u.5
for
4340379
zma-u.5
for
100193789
zma-u.5
for
100283253
tae-r.2
for
123164232
tae-r.2
for
123155856
tae-r.2
for
123147956
hvu-r.1
for
123407474
sbi-r.1
for
8077294
bdi-r.1
for
100842016
cre-r.1
for
CHLRE_08g372400v5


Ortholog ID: 4988
Species ghi ghi ghi ath ath bra bra bra bna bna bna cit gma gma vvi ppo mtr sly sly sot sot nta nta nta osa zma zma tae tae tae hvu sbi bdi cre
Symbol LOC107913834 LOC107897670 LOC107897464 UBC33 UBC34 LOC103842801 LOC103872515 LOC103835962 LOC106434915 LOC106411932 LOC106447238 LOC102618560 LOC100778181 LOC100789952 LOC100261654 LOC18094665 LOC11443912 LOC101248401 LOC543683 LOC102601750 LOC102586223 LOC107790696 LOC107775245 LOC107762511 LOC4340379 LOC100193789 LOC100283253 LOC123164232 LOC123155856 LOC123147956 LOC123407474 LOC8077294 LOC100842016 CHLRE_08g372400v5
Function* ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme 33 ubiquitin-conjugating enzyme 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34-like ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34-like ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin conjugating enzyme 2 ubiquitin-conjugating enzyme E2 34-like ubiquitin-conjugating enzyme E2 34-like ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 uncharacterized LOC100193789 ubiquitin-conjugating enzyme E2 J2 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34-like ubiquitin-conjugating enzyme E2 34 ubiquitin-conjugating enzyme E2 34 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04820 Cytoskeleton in muscle cells 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03015 mRNA surveillance pathway 3
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04120 Ubiquitin mediated proteolysis 4
ghi03022 Basal transcription factors 2
ghi04144 Endocytosis 2
ghi04141 Protein processing in endoplasmic reticulum 2
ghi03410 Base excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 4
ghi04120 Ubiquitin mediated proteolysis 4
ghi04141 Protein processing in endoplasmic reticulum 4
ghi03015 mRNA surveillance pathway 3
ghi03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 6
ath03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04120 Ubiquitin mediated proteolysis 5
ath04144 Endocytosis 4
ath04141 Protein processing in endoplasmic reticulum 3
ath04136 Autophagy - other 2
ath04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00190 Oxidative phosphorylation 3
bra04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 9
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 7
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04120 Ubiquitin mediated proteolysis 9
bna04141 Protein processing in endoplasmic reticulum 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04120 Ubiquitin mediated proteolysis 4
cit04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 4
gma04130 SNARE interactions in vesicular transport 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 8
gma04141 Protein processing in endoplasmic reticulum 4
gma04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04141 Protein processing in endoplasmic reticulum 3
vvi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04144 Endocytosis 2
ppo00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04120 Ubiquitin mediated proteolysis 4
mtr04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 3
sot03015 mRNA surveillance pathway 2
sot04075 Plant hormone signal transduction 2
sot04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
nta04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03010 Ribosome 2
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta03020 RNA polymerase 2
nta03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03013 Nucleocytoplasmic transport 4
nta03015 mRNA surveillance pathway 4
nta04120 Ubiquitin mediated proteolysis 2
nta04141 Protein processing in endoplasmic reticulum 2
nta00563 Glycosylphosphatidylinositol (GPI)-anchor biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 7
zma04141 Protein processing in endoplasmic reticulum 5
zma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04120 Ubiquitin mediated proteolysis 5
zma04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 6
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 5
tae04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 3
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
sbi03250 Viral life cycle - HIV-1 2
sbi03272 Virion - Hepatitis viruses 2
sbi04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
bdi04120 Ubiquitin mediated proteolysis 2
bdi04141 Protein processing in endoplasmic reticulum 2
bdi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04141 Protein processing in endoplasmic reticulum 2
cre03040 Spliceosome 2
cre03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107913834 107897670 107897464 835111 838300 103842801 103872515 103835962 106434915 106411932 106447238 102618560 100778181 100789952 100261654 18094665 11443912 101248401 543683 102601750 102586223 107790696 107775245 107762511 4340379 100193789 100283253 123164232 123155856 123147956 123407474 8077294 100842016 5726866
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