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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962313   DEAD-box ATP-dependent RNA helicase 39 
 ghi-r.1   107901758   DEAD-box ATP-dependent RNA helicase 39 
 cit-r.1   102611854   DEAD-box ATP-dependent RNA helicase 39-like 
 gma-u.5   100800575   DEAD-box ATP-dependent RNA helicase 39 
 mtr-u.5   25496268   DEAD-box ATP-dependent RNA helicase 39 
 mtr-u.5   120575995   DEAD-box ATP-dependent RNA helicase 39 
 mtr-u.5   120577871   DEAD-box ATP-dependent RNA helicase 39 

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Top 50 coexpressed genes to 107962313 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962313 (ghi-r.1 coexpression data)

CoexMap"107962313"


ghiLOC107962313 | Entrez gene ID : 107962313    
Species ghi cit gma mtr bra sot zma cre ppo sbi sly ath nta tae bna osa hvu vvi bdi
Paralog 2 1 1 3 0 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0003724 [list] [network] RNA helicase activity  (165 genes)  IEA  
GO:0003729 [list] [network] mRNA binding  (890 genes)  IEA  
GO:0005524 [list] [network] ATP binding  (5155 genes)  IEA  
Protein XP_016754141.1 [sequence] [blastp]
XP_016754142.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_016754141.1)
chlo 6,  nucl 2,  mito 1,  cyto_nucl 1,  cyto_mito 1,  cysk_nucl 1  (predict for XP_016754142.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016754141.1)
mito 6  (predict for XP_016754142.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962313
ghi-r.1
for
107901758
cit-r.1
for
102611854
gma-u.5
for
100800575
mtr-u.5
for
25496268
mtr-u.5
for
120575995
mtr-u.5
for
120577871


Ortholog ID: 16424
Species ghi ghi cit gma mtr mtr mtr
Symbol LOC107962313 LOC107901758 LOC102611854 LOC100800575 LOC25496268 LOC120577871 LOC120580842
Function* DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39-like DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39 DEAD-box ATP-dependent RNA helicase 39
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03020 RNA polymerase 3
mtr03060 Protein export 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 5
mtr03020 RNA polymerase 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962313 107901758 102611854 100800575 25496268 120577871 120580842
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