ATTED-II : GeneCoexpression result

Species	Gene	Description
ghi-r.1	107962408	probable protein phosphatase 2C 60
ath-u.5	AT2G25070	Protein phosphatase 2C family protein
ath-u.5	AT4G31860	Protein phosphatase 2C family protein
gma-u.5	100787778	probable protein phosphatase 2C 60
gma-u.5	100787633	probable protein phosphatase 2C 60-like
gma-u.5	100776787	probable protein phosphatase 2C 60
vvi-u.5	100261065	probable protein phosphatase 2C 60
vvi-u.5	100248342	probable protein phosphatase 2C 60
ppo-u.5	7478309	probable protein phosphatase 2C 60
ppo-u.5	7468692	probable protein phosphatase 2C 60
ppo-u.5	18094245	probable protein phosphatase 2C 60
mtr-u.5	11423334	probable protein phosphatase 2C 60
mtr-u.5	11425794	probable protein phosphatase 2C 60
mtr-u.5	25491188	probable protein phosphatase 2C 60
sly-u.5	101257585	probable protein phosphatase 2C 21
sly-u.5	101256659	probable protein phosphatase 2C 60
osa-u.5	4347831	probable protein phosphatase 2C 70
osa-u.5	4341693	probable protein phosphatase 2C 58
zma-u.5	100382283	putative protein phosphatase 2C 21
zma-u.5	100272962	uncharacterized LOC100272962
zma-u.5	541808	protein phosphatase type-2C

Annotation

functional annotation

KEGG

GO BP

GO:0006470 [list] [network] protein dephosphorylation

(336 genes)

IEA

GO CC

GO MF

GO:0004722 [list] [network] protein serine/threonine phosphatase activity	(301 genes)	IEA
GO:0043169 [list] [network] cation binding	(4837 genes)	IEA

Protein

XP_016754281.1 [sequence] [blastp]
XP_040952094.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 6, mito 2, chlo 1, cyto 1, vacu 1	(predict for XP_016754281.1)
nucl 5, cyto 2, chlo 1, extr 1	(predict for XP_040952094.1)

Subcellular
localization
TargetP

other 9, chlo 3	(predict for XP_016754281.1)
other 7, mito 3	(predict for XP_040952094.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107962408	ath-u.5 for AT2G25070	ath-u.5 for AT4G31860	gma-u.5 for 100787778	gma-u.5 for 100787633	gma-u.5 for 100776787	vvi-u.5 for 100261065	vvi-u.5 for 100248342	ppo-u.5 for 7478309	ppo-u.5 for 7468692	ppo-u.5 for 18094245	mtr-u.5 for 11423334	mtr-u.5 for 11425794	mtr-u.5 for 25491188	sly-u.5 for 101257585	sly-u.5 for 101256659	osa-u.5 for 4347831	osa-u.5 for 4341693	zma-u.5 for 100382283	zma-u.5 for 100272962	zma-u.5 for 541808

Ortholog

Ortholog ID: 1227

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

Function^*

probable protein phosphatase 2C 60

probable protein phosphatase 2C 21

Protein phosphatase 2C family protein

probable protein phosphatase 2C 21

probable protein phosphatase 2C 60

probable protein phosphatase 2C 21

probable protein phosphatase 2C 60

probable protein phosphatase 2C 21

probable protein phosphatase 2C 60

putative protein phosphatase 2C 60

probable protein phosphatase 2C 11

probable protein phosphatase 2C 58

uncharacterized LOC100272962

probable protein phosphatase 2C 70

probable protein phosphatase 2C 11

probable protein phosphatase 2C 70

probable protein phosphatase 2C 58

probable protein phosphatase 2C 11

probable protein phosphatase 2C 21

probable protein phosphatase 2C 58

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00562	Inositol phosphate metabolism	2
ghi04070	Phosphatidylinositol signaling system	2
ghi00564	Glycerophospholipid metabolism	2
ghi00565	Ether lipid metabolism	2
ghi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	3
ath01210	2-Oxocarboxylic acid metabolism	2
ath00640	Propanoate metabolism	2
ath04146	Peroxisome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	4
ath04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00190	Oxidative phosphorylation	2
bra04130	SNARE interactions in vesicular transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00510	N-Glycan biosynthesis	2
bna00513	Various types of N-glycan biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	6
gma04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03010	Ribosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04136	Autophagy - other	3
vvi04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00071	Fatty acid degradation	2
ppo00330	Arginine and proline metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04130	SNARE interactions in vesicular transport	4
sly04144	Endocytosis	3
sly03250	Viral life cycle - HIV-1	2
sly03272	Virion - Hepatitis viruses	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	3
sly03008	Ribosome biogenesis in eukaryotes	2
sly00561	Glycerolipid metabolism	2
sly00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01200	Carbon metabolism	6
sot01230	Biosynthesis of amino acids	6
sot00710	Carbon fixation by Calvin cycle	5
sot00220	Arginine biosynthesis	4
sot00250	Alanine, aspartate and glutamate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00860	Porphyrin metabolism	2
nta03440	Homologous recombination	2
nta03460	Fanconi anemia pathway	2
nta03450	Non-homologous end-joining	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04120	Ubiquitin mediated proteolysis	7
nta03083	Polycomb repressive complex	3
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00030	Pentose phosphate pathway	3
tae01200	Carbon metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00561	Glycerolipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi04075	Plant hormone signal transduction	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00280	Valine, leucine and isoleucine degradation	3
sbi00410	beta-Alanine metabolism	3
sbi00640	Propanoate metabolism	3
sbi01200	Carbon metabolism	3
sbi03050	Proteasome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04626	Plant-pathogen interaction	3
bdi04075	Plant hormone signal transduction	2
bdi03083	Polycomb repressive complex	2
bdi04070	Phosphatidylinositol signaling system	2

Expression

Expression pattern

Entrez Gene ID^*

107906816

121229331

829315

817045

103864603

103862087

106389767

106423363

102621584

102623909

100499713

100787778

100248342

100261065

7478309

7468692

11425794

11423334

101257585

101256659

102583328

102583387

107803665

107825429

4328505

103638831

100272962

123104798

123136551

123451960

123413610

8077623

8056487

100840499

5724767

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 107962408 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107962408 (ghi-r.1 coexpression data)


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	bdi	hvu	bra	cit	bna	sbi	sot	nta	cre	tae
Paralog	1	2	3	2	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107962408 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107962408 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**