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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962548   uncharacterized LOC107962548 
 ghi-r.1   107901360   uncharacterized LOC107901360 
 ghi-r.1   107942487   uncharacterized LOC107942487 
 ghi-r.1   107909204   uncharacterized LOC107909204 
 cit-r.1   102616381   uncharacterized LOC102616381 
 gma-u.5   100783722   uncharacterized LOC100783722 
 gma-u.5   100783604   uncharacterized LOC100783604 
 vvi-u.5   100263653   uncharacterized LOC100263653 
 ppo-u.5   18096325   uncharacterized RING finger protein P4H10.07 
 ppo-u.5   18105115   uncharacterized LOC18105115 
 ppo-u.5   7489479   uncharacterized LOC7489479 
 mtr-u.5   11438190   uncharacterized LOC11438190 
 sly-u.5   101251898   uncharacterized LOC101251898 
 sly-u.5   101247366   E3 ubiquitin ligase BIG BROTHER-related 
 sot-r.1   102587514   uncharacterized RING finger protein C4G3.12c-like 
 sot-r.1   102589159   E3 ubiquitin-protein ligase RLIM-like 
 nta-r.1   107797593   uncharacterized LOC107797593 
 nta-r.1   107796892   uncharacterized LOC107796892 
 nta-r.1   107790564   uncharacterized LOC107790564 
 osa-u.5   4331024   uncharacterized LOC4331024 
 zma-u.5   100501846   putative RING zinc finger domain superfamily protein 
 zma-u.5   100273142   uncharacterized LOC100273142 
 zma-u.5   103626766   E3 ubiquitin-protein ligase RNF167-like 
 tae-r.2   123145939   uncharacterized LOC123145939 
 tae-r.2   123128796   uncharacterized LOC123128796 
 tae-r.2   123139186   uncharacterized LOC123139186 
 hvu-r.1   123401880   uncharacterized LOC123401880 
 sbi-r.1   8056393   uncharacterized LOC8056393 
 bdi-r.1   100833892   uncharacterized LOC100833892 

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Top 50 coexpressed genes to 107962548 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962548 (ghi-r.1 coexpression data)

CoexMap"107962548"


ghiLOC107962548 | Entrez gene ID : 107962548    
Species ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi bra bna cre ath
Paralog 4 1 2 1 3 1 2 2 3 1 3 3 1 1 1 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_016754469.1 [sequence] [blastp]
XP_016754470.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 4,  mito 4,  nucl 1  (predict for XP_016754469.1)
nucl 6,  pero 1,  chlo 1,  cyto 1,  mito 1,  cysk 1,  chlo_mito 1  (predict for XP_016754470.1)
Subcellular
localization
TargetP
mito 5,  chlo 3  (predict for XP_016754469.1)
chlo 7,  other 4  (predict for XP_016754470.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962548
ghi-r.1
for
107901360
ghi-r.1
for
107942487
ghi-r.1
for
107909204
cit-r.1
for
102616381
gma-u.5
for
100783722
gma-u.5
for
100783604
vvi-u.5
for
100263653
ppo-u.5
for
18096325
ppo-u.5
for
18105115
ppo-u.5
for
7489479
mtr-u.5
for
11438190
sly-u.5
for
101251898
sly-u.5
for
101247366
sot-r.1
for
102587514
sot-r.1
for
102589159
nta-r.1
for
107797593
nta-r.1
for
107796892
nta-r.1
for
107790564
osa-u.5
for
4331024
zma-u.5
for
100501846
zma-u.5
for
100273142
zma-u.5
for
103626766
tae-r.2
for
123145939
tae-r.2
for
123128796
tae-r.2
for
123139186
hvu-r.1
for
123401880
sbi-r.1
for
8056393
bdi-r.1
for
100833892


Ortholog ID: 7479
Species ghi ghi ghi cit gma gma vvi ppo ppo ppo mtr sly sly sot sot nta nta nta osa zma zma zma tae tae tae hvu sbi bdi
Symbol LOC107901360 LOC107942487 LOC107909204 LOC102616381 LOC100783722 LOC100783604 LOC100263653 LOC18096325 LOC18105115 LOC7489479 LOC11438190 LOC101251898 LOC101247366 LOC102587514 LOC102589159 LOC107797593 LOC107796892 LOC107764391 LOC4331024 LOC100501846 LOC100273142 LOC103626766 LOC123145939 LOC123128796 LOC123139186 LOC123401880 LOC8056393 LOC100833892
Function* uncharacterized LOC107901360 uncharacterized LOC107942487 uncharacterized LOC107909204 uncharacterized LOC102616381 uncharacterized LOC100783722 uncharacterized LOC100783604 uncharacterized LOC100263653 uncharacterized RING finger protein P4H10.07 uncharacterized LOC18105115 uncharacterized LOC7489479 uncharacterized LOC11438190 uncharacterized LOC101251898 E3 ubiquitin ligase BIG BROTHER-related uncharacterized RING finger protein C4G3.12c-like E3 ubiquitin-protein ligase RLIM-like uncharacterized LOC107797593 uncharacterized LOC107796892 uncharacterized LOC107764391 uncharacterized LOC4331024 putative RING zinc finger domain superfamily protein uncharacterized LOC100273142 E3 ubiquitin-protein ligase RNF167-like uncharacterized LOC123145939 uncharacterized LOC123128796 uncharacterized LOC123139186 uncharacterized LOC123401880 uncharacterized LOC8056393 uncharacterized LOC100833892
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00906 Carotenoid biosynthesis 2
ghi00230 Purine metabolism 2
ghi00261 Monobactam biosynthesis 2
ghi00450 Selenocompound metabolism 2
ghi00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
gma04141 Protein processing in endoplasmic reticulum 2
gma03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04136 Autophagy - other 2
mtr00010 Glycolysis / Gluconeogenesis 2
mtr00620 Pyruvate metabolism 2
mtr01240 Biosynthesis of cofactors 2
mtr01200 Carbon metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00280 Valine, leucine and isoleucine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00562 Inositol phosphate metabolism 2
sot04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 4
nta04626 Plant-pathogen interaction 2
nta00562 Inositol phosphate metabolism 2
nta04070 Phosphatidylinositol signaling system 2
nta04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04136 Autophagy - other 3
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04075 Plant hormone signal transduction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901360 107942487 107909204 102616381 100783722 100783604 100263653 18096325 18105115 7489479 11438190 101251898 101247366 102587514 102589159 107797593 107796892 107764391 4331024 100501846 100273142 103626766 123145939 123128796 123139186 123401880 8056393 100833892
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