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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962667   ras-related protein Rab5 
 ath-u.5   ARA7   Ras-related small GTP-binding family protein 
 ath-u.5   RHA1   Ras small GTP-binding family protein 
 gma-u.5   100788883   ras-related protein RABF2b 
 gma-u.5   100791620   ras-related protein RHN1-like 
 gma-u.5   100810011   ras-related protein RHN1 
 vvi-u.5   100259459   ras-related protein RHN1 
 vvi-u.5   100263448   ras-related protein RHN1 
 vvi-u.5   100258211   ras-related protein Rab5-like 
 ppo-u.5   18107620   ras-related protein RHN1 
 ppo-u.5   7457605   ras-related protein RABF2a 
 ppo-u.5   18103881   ras-related protein RABF2a 
 mtr-u.5   11417941   ras-related protein RHN1 
 mtr-u.5   11435335   ras-related protein RHN1 
 sly-u.5   101247094   ras-related protein RABF2a 
 sly-u.5   101265393   ras-related protein RHN1 
 sly-u.5   101261973   ras-related protein RHN1 
 osa-u.5   4352862   ras-related protein RABF2a 
 osa-u.5   4333662   ras-related protein Rab5A-like 
 zma-u.5   100281304   ras-related protein RHN1 
 zma-u.5   100193933   ras-related protein RABF2a 
 zma-u.5   100191530   uncharacterized LOC100191530 

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Top 50 coexpressed genes to 107962667 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962667 (ghi-r.1 coexpression data)

CoexMap"107962667"


ghiLOC107962667 | Entrez gene ID : 107962667    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 2 3 3 3 2 3 2 3 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi04144 [list] [network] Endocytosis (463 genes)
ghi04145 [list] [network] Phagosome (280 genes)
ghi04148 [list] [network] Efferocytosis (152 genes)
GO BP
GO CC
GO:0005768 [list] [network] endosome  (492 genes)  IEA  
GO:0005794 [list] [network] Golgi apparatus  (1381 genes)  IEA  
GO MF
GO:0003924 [list] [network] GTPase activity  (613 genes)  IEA  
GO:0005525 [list] [network] GTP binding  (687 genes)  IEA  
Protein XP_016754627.1 [sequence] [blastp]
XP_016754628.1 [sequence] [blastp]
XP_040971060.1 [sequence] [blastp]
XP_040971061.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 10  (predict for XP_016754627.1)
chlo 8,  nucl 1  (predict for XP_016754628.1)
chlo 10  (predict for XP_040971060.1)
chlo 7,  mito 3  (predict for XP_040971061.1)
Subcellular
localization
TargetP
mito 4,  other 3,  scret 3  (predict for XP_016754627.1)
other 5,  mito 5  (predict for XP_016754628.1)
mito 4,  other 3,  scret 3  (predict for XP_040971060.1)
mito 4,  other 3,  scret 3  (predict for XP_040971061.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962667
ath-u.5
for
ARA7
ath-u.5
for
RHA1
gma-u.5
for
100788883
gma-u.5
for
100791620
gma-u.5
for
100810011
vvi-u.5
for
100259459
vvi-u.5
for
100263448
vvi-u.5
for
100258211
ppo-u.5
for
18107620
ppo-u.5
for
7457605
ppo-u.5
for
18103881
mtr-u.5
for
11417941
mtr-u.5
for
11435335
sly-u.5
for
101247094
sly-u.5
for
101265393
sly-u.5
for
101261973
osa-u.5
for
4352862
osa-u.5
for
4333662
zma-u.5
for
100281304
zma-u.5
for
100193933
zma-u.5
for
100191530


Ortholog ID: 1279
Species ghi ghi ath ath bra bra bna bna cit cit gma vvi vvi ppo ppo mtr mtr sly sly sot sot nta nta osa osa zma zma tae hvu sbi bdi bdi cre
Symbol LOC121230850 LOC107949588 ARA7 RHA1 LOC103827815 LOC103839137 LOC106391297 LOC125578266 LOC102610579 LOC102614189 LOC100810011 LOC100263448 LOC100259459 LOC7457605 LOC18103881 LOC11435335 LOC11417941 LOC101247094 LOC101261973 LOC102588489 LOC102601055 LOC107789856 LOC107815724 LOC4333662 LOC4352862 LOC100191530 LOC100193933 LOC123119143 LOC123395391 LOC110437660 LOC100845928 LOC100835493 CHLRE_12g517400v5
Function* ras-related protein RABF2b ras-related protein RHN1 Ras-related small GTP-binding family protein Ras small GTP-binding family protein ras-related protein RABF2a ras-related protein RABF2a ras-related protein RABF2a-like ras-related protein RABF2a-like ras-related protein RHN1 ras-related protein Rab5A-like ras-related protein RHN1 ras-related protein RHN1 ras-related protein RHN1 ras-related protein RABF2a ras-related protein RABF2a ras-related protein RHN1 ras-related protein RHN1 ras-related protein RABF2a ras-related protein RHN1 ras-related protein RABF2a ras-related protein RHN1 ras-related protein Rab5-like ras-related protein RHN1 ras-related protein Rab5A-like ras-related protein RABF2a uncharacterized LOC100191530 ras-related protein RABF2a ras-related protein Rab5A ras-related protein Rab5A ras-related protein RABF2a-like ras-related protein RABF2b ras-related protein RABF2a uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04130 SNARE interactions in vesicular transport 6
ghi04144 Endocytosis 3
ghi04145 Phagosome 2
ghi04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04144 Endocytosis 5
ghi04145 Phagosome 4
ghi04148 Efferocytosis 4
ghi00062 Fatty acid elongation 2
ghi01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 3
ath04120 Ubiquitin mediated proteolysis 3
ath03010 Ribosome 2
ath04130 SNARE interactions in vesicular transport 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04130 SNARE interactions in vesicular transport 2
ath04144 Endocytosis 2
ath04145 Phagosome 2
ath04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 7
bna04145 Phagosome 7
bna04148 Efferocytosis 7
bna04130 SNARE interactions in vesicular transport 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04144 Endocytosis 6
bna04145 Phagosome 6
bna04148 Efferocytosis 6
bna04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04144 Endocytosis 6
gma03250 Viral life cycle - HIV-1 3
gma03272 Virion - Hepatitis viruses 3
gma04145 Phagosome 2
gma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 5
ppo04144 Endocytosis 4
ppo04148 Efferocytosis 3
ppo03050 Proteasome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04145 Phagosome 6
ppo04144 Endocytosis 3
ppo04148 Efferocytosis 3
ppo04142 Lysosome 2
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 4
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
mtr04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
mtr04130 SNARE interactions in vesicular transport 2
mtr03250 Viral life cycle - HIV-1 2
mtr03272 Virion - Hepatitis viruses 2
mtr04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04145 Phagosome 2
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 3
sly04141 Protein processing in endoplasmic reticulum 2
sly04145 Phagosome 2
sly04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04144 Endocytosis 3
sot04145 Phagosome 2
sot04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot01200 Carbon metabolism 5
sot04146 Peroxisome 3
sot00020 Citrate cycle (TCA cycle) 3
sot01210 2-Oxocarboxylic acid metabolism 3
sot04120 Ubiquitin mediated proteolysis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04120 Ubiquitin mediated proteolysis 3
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04144 Endocytosis 2
nta04145 Phagosome 2
nta04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04144 Endocytosis 3
osa00520 Amino sugar and nucleotide sugar metabolism 3
osa01250 Biosynthesis of nucleotide sugars 3
osa04141 Protein processing in endoplasmic reticulum 2
osa00053 Ascorbate and aldarate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 4
osa03083 Polycomb repressive complex 2
osa04120 Ubiquitin mediated proteolysis 2
osa04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 9
zma04145 Phagosome 4
zma04148 Efferocytosis 4
zma03250 Viral life cycle - HIV-1 3
zma03272 Virion - Hepatitis viruses 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04144 Endocytosis 6
zma04130 SNARE interactions in vesicular transport 4
zma04136 Autophagy - other 3
zma04145 Phagosome 2
zma04148 Efferocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04136 Autophagy - other 6
tae04144 Endocytosis 3
tae04145 Phagosome 3
tae04148 Efferocytosis 3
tae03083 Polycomb repressive complex 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04130 SNARE interactions in vesicular transport 2
bdi04144 Endocytosis 2
bdi04136 Autophagy - other 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04144 Endocytosis 4
bdi04145 Phagosome 4
bdi04148 Efferocytosis 4
bdi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 5
cre04145 Phagosome 3
cre04148 Efferocytosis 2
cre00190 Oxidative phosphorylation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 121230850 107949588 827706 834549 103827815 103839137 106391297 125578266 102610579 102614189 100810011 100263448 100259459 7457605 18103881 11435335 11417941 101247094 101261973 102588489 102601055 107789856 107815724 4333662 4352862 100191530 100193933 123119143 123395391 110437660 100845928 100835493 5722641
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