ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107962718	hexokinase-1
ghi-r.1	107891712	hexokinase-1
ghi-r.1	107893309	hexokinase-1
ath-u.5	ATHXK4	Hexokinase
ath-u.5	HKL1	hexokinase-like 1
bra-r.6	103871346	hexokinase-3
bra-r.6	103869365	hexokinase-4
bra-r.6	103868622	hexokinase-3
bna-r.1	106445383	hexokinase-1
bna-r.1	106439029	hexokinase-3
bna-r.1	106428882	hexokinase-4-like
cit-r.1	102626762	hexokinase-3-like
cit-r.1	102612701	hexokinase-1-like
cit-r.1	102577960	hexokinase
gma-u.5	100786385	hexokinase-1
gma-u.5	100796995	hexokinase-1
gma-u.5	100790064	hexokinase-3
vvi-u.5	100263580	hexokinase-3
vvi-u.5	HXK2	hexokinase
vvi-u.5	100244595	hexokinase-2
ppo-u.5	7461567	hexokinase-1
ppo-u.5	7470585	hexokinase-1
ppo-u.5	7478513	hexokinase-3
mtr-u.5	25496982	hexokinase-1
mtr-u.5	11426910	hexokinase-3
mtr-u.5	11421510	hexokinase-2, chloroplastic
sly-u.5	HXK4	plastidic hexokinase
sly-u.5	HXK3	hexokinase
sly-u.5	hxk1	hexokinase
sot-r.1	102577690	hexokinase 2
sot-r.1	102605773	hexokinase-1
sot-r.1	102604144	hexokinase-1
nta-r.1	107797523	hexokinase-1
nta-r.1	107807808	hexokinase-1-like
nta-r.1	107810082	hexokinase-2-like
osa-u.5	4326776	hexokinase-8-like
osa-u.5	4326516	hexokinase-3-like
osa-u.5	4326547	hexokinase-6-like
zma-u.5	103651223	hexokinase-6
zma-u.5	100279587	hexokinase6
zma-u.5	100283735	hexokinase-1
tae-r.2	123041226	hexokinase-7
tae-r.2	123063624	hexokinase-5
tae-r.2	123061949	hexokinase-6
hvu-r.1	123431466	hexokinase-4, chloroplastic
hvu-r.1	123442910	hexokinase-8-like
hvu-r.1	123444309	hexokinase-9-like
sbi-r.1	8055699	hexokinase-7
sbi-r.1	8068947	hexokinase-5
sbi-r.1	8069810	hexokinase-2
bdi-r.1	106866636	uncharacterized LOC106866636
bdi-r.1	100823060	hexokinase-5
bdi-r.1	100824391	hexokinase-6
cre-r.1	CHLRE_02g117500v5	uncharacterized protein

Top 50 coexpressed genes to 107962718 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107962718 (ghi-r.1 coexpression data)

CoexMap"107962718"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00010 [list] [network] Glycolysis / Gluconeogenesis (341 genes)

ghi00051 [list] [network] Fructose and mannose metabolism (138 genes)

ghi00052 [list] [network] Galactose metabolism (140 genes)

ghi00500 [list] [network] Starch and sucrose metabolism (349 genes)

ghi00520 [list] [network] Amino sugar and nucleotide sugar metabolism (312 genes)

ghi01200 [list] [network] Carbon metabolism (681 genes)

ghi01250 [list] [network] Biosynthesis of nucleotide sugars (245 genes)

GO BP

GO:0001678 [list] [network] intracellular glucose homeostasis	(15 genes)	IEA
GO:0046835 [list] [network] carbohydrate phosphorylation	(17 genes)	IEA
GO:0051156 [list] [network] glucose 6-phosphate metabolic process	(75 genes)	IEA
GO:0006006 [list] [network] glucose metabolic process	(114 genes)	IEA
GO:0006096 [list] [network] glycolytic process	(143 genes)	IEA

GO CC

GO:0005739 [list] [network] mitochondrion	(1525 genes)	IEA
GO:0005829 [list] [network] cytosol	(2580 genes)	IEA

GO MF

GO:0004340 [list] [network] glucokinase activity	(11 genes)	IEA
GO:0005536 [list] [network] D-glucose binding	(15 genes)	IEA
GO:0008865 [list] [network] fructokinase activity	(23 genes)	IEA
GO:0005524 [list] [network] ATP binding	(5155 genes)	IEA

Protein

XP_016754690.2 [sequence] [blastp]
XP_016754691.2 [sequence] [blastp]
XP_040971170.1 [sequence] [blastp]
XP_040971171.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 9	(predict for XP_016754690.2)
chlo 9	(predict for XP_016754691.2)
chlo 9	(predict for XP_040971170.1)
chlo 9	(predict for XP_040971171.1)

Subcellular
localization
TargetP

scret 7	(predict for XP_016754690.2)
scret 7	(predict for XP_016754691.2)
scret 7	(predict for XP_040971170.1)
scret 7	(predict for XP_040971171.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107962718	ghi-r.1 for 107891712	ghi-r.1 for 107893309	ath-u.5 for ATHXK4	ath-u.5 for HKL1	bra-r.6 for 103871346	bra-r.6 for 103869365	bra-r.6 for 103868622	bna-r.1 for 106445383	bna-r.1 for 106439029	bna-r.1 for 106428882	cit-r.1 for 102626762	cit-r.1 for 102612701	cit-r.1 for 102577960	gma-u.5 for 100786385	gma-u.5 for 100796995	gma-u.5 for 100790064	vvi-u.5 for 100263580	vvi-u.5 for HXK2	vvi-u.5 for 100244595	ppo-u.5 for 7461567	ppo-u.5 for 7470585	ppo-u.5 for 7478513	mtr-u.5 for 25496982	mtr-u.5 for 11426910	mtr-u.5 for 11421510	sly-u.5 for HXK4	sly-u.5 for HXK3	sly-u.5 for hxk1	sot-r.1 for 102577690	sot-r.1 for 102605773	sot-r.1 for 102604144	nta-r.1 for 107797523	nta-r.1 for 107807808	nta-r.1 for 107810082	osa-u.5 for 4326776	osa-u.5 for 4326516	osa-u.5 for 4326547	zma-u.5 for 103651223	zma-u.5 for 100279587	zma-u.5 for 100283735	tae-r.2 for 123041226	tae-r.2 for 123063624	tae-r.2 for 123061949	hvu-r.1 for 123431466	hvu-r.1 for 123442910	hvu-r.1 for 123444309	sbi-r.1 for 8055699	sbi-r.1 for 8068947	sbi-r.1 for 8069810	bdi-r.1 for 106866636	bdi-r.1 for 100823060	bdi-r.1 for 100824391	cre-r.1 for CHLRE_02g117500v5

Ortholog

Ortholog ID: 354

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

LOC107891712

LOC107902724

ATHXK4

HXK1

HXK2

hxk1

Hxk2

HXKRP1

Function^*

hexokinase-1

Hexokinase

hexokinase 1

hexokinase-1

hexokinase-3

hexokinase-3-like

hexokinase-1

hexokinase-like 1 protein

hexokinase-3-like

hexokinase

hexokinase-2, chloroplastic

hexokinase-3

hexokinase

hexokinase-2

hexokinase-1

hexokinase-3

hexokinase-2, chloroplastic

hexokinase-3

hexokinase-2, chloroplastic

hexokinase-1

hexokinase

hexokinase-3-like

hexokinase

hexokinase 2

hexokinase-1

hexokinase-related protein 1

hexokinase-1

hexokinase-1-like

hexokinase-2-like

hexokinase-7-like

hexokinase-9-like

hexokinase6

hexokinase 2

hexokinase3

hexokinase-9

hexokinase-2

hexokinase-9

hexokinase-4, chloroplastic

hexokinase-5

hexokinase-2

hexokinase-7

hexokinase-5

hexokinase-8

hexokinase-5

hexokinase-6

hexokinase-9

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2
ghi00052	Galactose metabolism	2
ghi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	4
ghi00052	Galactose metabolism	3
ghi01250	Biosynthesis of nucleotide sugars	3
ghi00010	Glycolysis / Gluconeogenesis	2
ghi00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00520	Amino sugar and nucleotide sugar metabolism	2
ath01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01200	Carbon metabolism	5
ath00190	Oxidative phosphorylation	5
ath00010	Glycolysis / Gluconeogenesis	4
ath00020	Citrate cycle (TCA cycle)	3
ath00620	Pyruvate metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	9
bra00710	Carbon fixation by Calvin cycle	7
bra00020	Citrate cycle (TCA cycle)	5
bra00270	Cysteine and methionine metabolism	5
bra00566	Sulfoquinovose metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra01200	Carbon metabolism	5
bra00630	Glyoxylate and dicarboxylate metabolism	3
bra00500	Starch and sucrose metabolism	3
bra00020	Citrate cycle (TCA cycle)	2
bra00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra04075	Plant hormone signal transduction	3
bra00010	Glycolysis / Gluconeogenesis	3
bra00051	Fructose and mannose metabolism	3
bra00052	Galactose metabolism	3
bra00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	7
bna00051	Fructose and mannose metabolism	7
bna00052	Galactose metabolism	7
bna00500	Starch and sucrose metabolism	7
bna00520	Amino sugar and nucleotide sugar metabolism	7

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00010	Glycolysis / Gluconeogenesis	4
bna00051	Fructose and mannose metabolism	4
bna00052	Galactose metabolism	4
bna00500	Starch and sucrose metabolism	4
bna00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00270	Cysteine and methionine metabolism	4
bna01200	Carbon metabolism	3
bna00010	Glycolysis / Gluconeogenesis	2
bna00051	Fructose and mannose metabolism	2
bna00052	Galactose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit00520	Amino sugar and nucleotide sugar metabolism	2
cit01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04075	Plant hormone signal transduction	4
cit00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma00051	Fructose and mannose metabolism	4
gma00052	Galactose metabolism	4
gma00500	Starch and sucrose metabolism	4
gma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma00051	Fructose and mannose metabolism	4
gma00052	Galactose metabolism	4
gma00500	Starch and sucrose metabolism	4
gma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00010	Glycolysis / Gluconeogenesis	4
gma00051	Fructose and mannose metabolism	4
gma00052	Galactose metabolism	4
gma00500	Starch and sucrose metabolism	4
gma00520	Amino sugar and nucleotide sugar metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	3
vvi00030	Pentose phosphate pathway	2
vvi00480	Glutathione metabolism	2
vvi01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00520	Amino sugar and nucleotide sugar metabolism	2
vvi01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	4
vvi00670	One carbon pool by folate	3
vvi00999	Biosynthesis of various plant secondary metabolites	3
vvi00260	Glycine, serine and threonine metabolism	2
vvi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	4
ppo00030	Pentose phosphate pathway	2
ppo00480	Glutathione metabolism	2
ppo00561	Glycerolipid metabolism	2
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00010	Glycolysis / Gluconeogenesis	2
ppo00051	Fructose and mannose metabolism	2
ppo00052	Galactose metabolism	2
ppo00500	Starch and sucrose metabolism	2
ppo00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo01250	Biosynthesis of nucleotide sugars	2
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	2
mtr04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00010	Glycolysis / Gluconeogenesis	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr03040	Spliceosome	3
mtr03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly01200	Carbon metabolism	5
sly00500	Starch and sucrose metabolism	3
sly01240	Biosynthesis of cofactors	3
sly00270	Cysteine and methionine metabolism	3
sly01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00270	Cysteine and methionine metabolism	4
sly01200	Carbon metabolism	3
sly01230	Biosynthesis of amino acids	3
sly00480	Glutathione metabolism	2
sly00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	10
sot01200	Carbon metabolism	6
sot04145	Phagosome	6
sot00020	Citrate cycle (TCA cycle)	4
sot00010	Glycolysis / Gluconeogenesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot03050	Proteasome	5
sot00190	Oxidative phosphorylation	5
sot00051	Fructose and mannose metabolism	3
sot00500	Starch and sucrose metabolism	3
sot00010	Glycolysis / Gluconeogenesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	10
nta00190	Oxidative phosphorylation	9
nta00020	Citrate cycle (TCA cycle)	8
nta00010	Glycolysis / Gluconeogenesis	6
nta01210	2-Oxocarboxylic acid metabolism	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta01200	Carbon metabolism	10
nta00190	Oxidative phosphorylation	9
nta00020	Citrate cycle (TCA cycle)	8
nta00010	Glycolysis / Gluconeogenesis	6
nta00620	Pyruvate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04712	Circadian rhythm - plant	4
nta03008	Ribosome biogenesis in eukaryotes	3
nta00920	Sulfur metabolism	2
nta00010	Glycolysis / Gluconeogenesis	2
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa01250	Biosynthesis of nucleotide sugars	2
osa00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	2
zma01250	Biosynthesis of nucleotide sugars	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	5
zma00010	Glycolysis / Gluconeogenesis	2
zma00051	Fructose and mannose metabolism	2
zma00052	Galactose metabolism	2
zma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00520	Amino sugar and nucleotide sugar metabolism	5
zma01250	Biosynthesis of nucleotide sugars	5
zma01200	Carbon metabolism	4
zma00010	Glycolysis / Gluconeogenesis	3
zma01240	Biosynthesis of cofactors	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00010	Glycolysis / Gluconeogenesis	6
tae00051	Fructose and mannose metabolism	6
tae00052	Galactose metabolism	6
tae00500	Starch and sucrose metabolism	6
tae00520	Amino sugar and nucleotide sugar metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae01200	Carbon metabolism	4
tae00620	Pyruvate metabolism	3
tae00710	Carbon fixation by Calvin cycle	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00941	Flavonoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01200	Carbon metabolism	7
hvu00020	Citrate cycle (TCA cycle)	5
hvu01210	2-Oxocarboxylic acid metabolism	3
hvu00010	Glycolysis / Gluconeogenesis	3
hvu04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00900	Terpenoid backbone biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01200	Carbon metabolism	12
bdi00020	Citrate cycle (TCA cycle)	11
bdi00620	Pyruvate metabolism	7
bdi01210	2-Oxocarboxylic acid metabolism	5
bdi00630	Glyoxylate and dicarboxylate metabolism	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre03010	Ribosome	3
cre00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
cre01240	Biosynthesis of cofactors	2
cre01200	Carbon metabolism	2

Expression

Expression pattern

Entrez Gene ID^*

107891712

107902724

821543

829034

103828273

103837987

103832872

106416669

106447109

106449712

102626762

102577960

102626483

100813589

100776994

100819464

100263580

100255753

100244595

7461567

7482338

7493962

11426910

11421510

11421234

543779

101256649

543638

102577690

102604144

102577859

107797523

107807808

107810082

4338010

4324666

100279587

100170246

542510

123062028

123064602

123070748

123431466

123446817

123448660

8055699

8068947

8084358

100823060

100824391

100830315

5727998

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	bra	bna	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	3	2	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	3	1

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107962718 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107962718 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**