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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107962968   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 ath-u.5   AT1G80880   Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5   100815237   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 vvi-u.5   100250190   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 ppo-u.5   18094250   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 mtr-u.5   25502112   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 sly-u.5   101257157   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 osa-u.5   4345145   pentatricopeptide repeat-containing protein At1g80880, mitochondrial 
 zma-u.5   100382781   uncharacterized LOC100382781 

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Top 50 coexpressed genes to 107962968 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107962968 (ghi-r.1 coexpression data)

CoexMap"107962968"


ghiLOC107962968 | Entrez gene ID : 107962968    
Species ghi ath gma vvi ppo mtr sly osa zma bdi hvu bra cit bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (10797 genes)  IEA  
Protein XP_016755043.1 [sequence] [blastp]
Subcellular
localization
wolf
mito 3,  chlo 3,  nucl 3,  cyto_mito 2  (predict for XP_016755043.1)
Subcellular
localization
TargetP
mito 6  (predict for XP_016755043.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107962968
ath-u.5
for
AT1G80880
gma-u.5
for
100815237
vvi-u.5
for
100250190
ppo-u.5
for
18094250
mtr-u.5
for
25502112
sly-u.5
for
101257157
osa-u.5
for
4345145
zma-u.5
for
100382781


Ortholog ID: 9893
Species ghi ghi ath bra bna bna cit gma vvi ppo mtr sly sot nta nta osa zma tae tae hvu hvu sbi bdi
Symbol LOC107962968 LOC107901687 AT1G80880 LOC103853209 LOC125586022 LOC106381552 LOC102622137 LOC100815237 LOC100250190 LOC18094250 LOC25502112 LOC101257157 LOC102593633 LOC107767665 LOC107796662 LOC4345145 LOC100382781 LOC123052882 LOC123129251 LOC123424668 LOC123440886 LOC8067984 LOC100838200
Function* pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial-like pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial uncharacterized LOC107767665 uncharacterized LOC107796662 pentatricopeptide repeat-containing protein At1g80880, mitochondrial uncharacterized LOC100382781 pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial-like pentatricopeptide repeat-containing protein At1g80880, mitochondrial-like pentatricopeptide repeat-containing protein At1g80880, mitochondrial pentatricopeptide repeat-containing protein At1g80880, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03010 Ribosome 3
mtr03020 RNA polymerase 2
mtr03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03420 Nucleotide excision repair 2
hvu03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00220 Arginine biosynthesis 2
sbi01210 2-Oxocarboxylic acid metabolism 2
sbi01230 Biosynthesis of amino acids 2
sbi03018 RNA degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107962968 107901687 844428 103853209 125586022 106381552 102622137 100815237 100250190 18094250 25502112 101257157 102593633 107767665 107796662 4345145 100382781 123052882 123129251 123424668 123440886 8067984 100838200
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