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Orthologous genes in OrthoFinder**

Species Gene Description
 ghi-r.1   107963546   uncharacterized LOC107963546 
 ath-u.5   UBC37   ubiquitin-conjugating enzyme 37 
 ppo-u.5   112327878   uncharacterized LOC112327878 
 sly-u.5   101249380   uncharacterized LOC101249380 
 osa-u.5   4324209   uncharacterized LOC4324209 
 zma-u.5   100286132   uncharacterized LOC100286132 

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Top 50 coexpressed genes to 107963546 (ghi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 107963546 (ghi-r.1 coexpression data)

CoexMap"107963546"


ghiLOC107963546 | Entrez gene ID : 107963546    
Species ghi ath ppo sly osa zma bdi mtr bra hvu vvi cit gma bna sbi sot nta cre tae
Paralog 1 1 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG ghi03460 [list] [network] Fanconi anemia pathway (91 genes)
GO BP
GO:0000209 [list] [network] protein polyubiquitination  (192 genes)  IEA  
GO:0006974 [list] [network] DNA damage response  (631 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (7681 genes)  IEA  
GO MF
GO:0061631 [list] [network] ubiquitin conjugating enzyme activity  (56 genes)  IEA  
Protein XP_040971299.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 3,  nucl 2,  cysk_nucl 1,  cyto 1,  E.R. 1,  cyto_E.R. 1  (predict for XP_040971299.1)
Subcellular
localization
TargetP
other 8  (predict for XP_040971299.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ghi-r.1
for
107963546
ath-u.5
for
UBC37
ppo-u.5
for
112327878
sly-u.5
for
101249380
osa-u.5
for
4324209
zma-u.5
for
100286132


Ortholog ID: 9507
Species ghi ath bra bna bna cit ppo sly sot nta nta osa zma tae tae hvu sbi bdi cre cre
Symbol LOC107901228 UBC37 LOC103860238 LOC125583687 LOC106361784 LOC102615715 LOC112327878 LOC101249380 LOC102578657 LOC107777942 LOC107831705 LOC4324209 LOC100286132 LOC123107725 LOC123180200 LOC123406028 LOC8082513 LOC100823742 CHLRE_13g570300v5 CHLRE_12g515450v5
Function* uncharacterized LOC107901228 ubiquitin-conjugating enzyme 37 probable ubiquitin-conjugating enzyme E2 37 probable ubiquitin-conjugating enzyme E2 37 probable ubiquitin-conjugating enzyme E2 37 uncharacterized LOC102615715 uncharacterized LOC112327878 uncharacterized LOC101249380 uncharacterized LOC102578657 uncharacterized LOC107777942 uncharacterized LOC107831705 uncharacterized LOC4324209 uncharacterized LOC100286132 uncharacterized LOC123107725 uncharacterized LOC123180200 uncharacterized LOC123406028 probable ubiquitin-conjugating enzyme E2 37 uncharacterized LOC100823742 uncharacterized protein uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03460 Fanconi anemia pathway 4
ghi04814 Motor proteins 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03010 Ribosome 7
bra03008 Ribosome biogenesis in eukaryotes 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03460 Fanconi anemia pathway 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 6
sot00230 Purine metabolism 2
sot00240 Pyrimidine metabolism 2
sot00480 Glutathione metabolism 2
sot01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 2
nta00900 Terpenoid backbone biosynthesis 2
nta03460 Fanconi anemia pathway 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
nta03013 Nucleocytoplasmic transport 2
nta03460 Fanconi anemia pathway 2
nta00620 Pyruvate metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00240 Pyrimidine metabolism 4
osa01232 Nucleotide metabolism 4
osa00230 Purine metabolism 3
osa00480 Glutathione metabolism 3
osa03030 DNA replication 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04814 Motor proteins 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04120 Ubiquitin mediated proteolysis 2
tae04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03013 Nucleocytoplasmic transport 3
tae03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04144 Endocytosis 2
hvu05100 Bacterial invasion of epithelial cells 2
hvu04142 Lysosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 4
bdi03082 ATP-dependent chromatin remodeling 3
bdi03460 Fanconi anemia pathway 2
bdi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre00280 Valine, leucine and isoleucine degradation 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 107901228 822045 103860238 125583687 106361784 102615715 112327878 101249380 102578657 107777942 107831705 4324209 100286132 123107725 123180200 123406028 8082513 100823742 5719124 5728764
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