ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
ghi-r.1	107963849	aminoacylase-1
ath-u.5	AQI	Peptidase M20/M25/M40 family protein
ath-u.5	AT1G44820	Peptidase M20/M25/M40 family protein
gma-u.5	100783172	aminoacylase-1
gma-u.5	100817383	aminoacylase-1
vvi-u.5	100260562	uncharacterized LOC100260562
vvi-u.5	100257526	uncharacterized LOC100257526
ppo-u.5	18098169	uncharacterized LOC18098169
ppo-u.5	7463357	uncharacterized LOC7463357
ppo-u.5	7463166	uncharacterized LOC7463166
mtr-u.5	11420656	aminoacylase-1
mtr-u.5	11429277	aminoacylase-1
mtr-u.5	11437031	aminoacylase-1
sly-u.5	543751	aminoacylase-1
sly-u.5	101248259	uncharacterized LOC101248259
osa-u.5	4340457	uncharacterized LOC4340457
osa-u.5	4346012	uncharacterized LOC4346012
zma-u.5	103634365	uncharacterized LOC103634365
zma-u.5	100283955	uncharacterized LOC100283955
zma-u.5	100282205	aminoacylase-1

Top 50 coexpressed genes to 107963849 (ghi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 107963849 (ghi-r.1 coexpression data)

CoexMap"107963849"

[Cytoscape]

Annotation

functional annotation

KEGG

ghi00220 [list] [network] Arginine biosynthesis (92 genes)

ghi01210 [list] [network] 2-Oxocarboxylic acid metabolism (211 genes)

ghi01230 [list] [network] Biosynthesis of amino acids (568 genes)

GO BP

GO:0006520 [list] [network] amino acid metabolic process

(883 genes)

IEA

GO CC

GO:0005737 [list] [network] cytoplasm

(13864 genes)

IEA

GO MF

GO:0004046 [list] [network] aminoacylase activity

(17 genes)

IEA

Protein

XP_040952929.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, cyto 1, plas 1, cyto_nucl 1, nucl_plas 1, cyto_plas 1

(predict for XP_040952929.1)

Subcellular
localization
TargetP

other 3

(predict for XP_040952929.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	ghi-r.1 for 107963849	ath-u.5 for AQI	ath-u.5 for AT1G44820	gma-u.5 for 100783172	gma-u.5 for 100817383	vvi-u.5 for 100260562	vvi-u.5 for 100257526	ppo-u.5 for 18098169	ppo-u.5 for 7463357	ppo-u.5 for 7463166	mtr-u.5 for 11420656	mtr-u.5 for 11429277	mtr-u.5 for 11437031	sly-u.5 for 543751	sly-u.5 for 101248259	osa-u.5 for 4340457	osa-u.5 for 4346012	zma-u.5 for 103634365	zma-u.5 for 100283955	zma-u.5 for 100282205

Ortholog

Ortholog ID: 1671

Species

ghi

ath

bra

bna

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

cre

Symbol

AQI

Function^*

aminoacylase-1

Peptidase M20/M25/M40 family protein

aminoacylase-1B

aminoacylase-1

uncharacterized LOC102622833

uncharacterized LOC102611318

aminoacylase-1

uncharacterized LOC100260562

uncharacterized LOC100257526

uncharacterized LOC7463357

uncharacterized LOC18098169

aminoacylase-1

uncharacterized LOC101248259

aminoacylase-1

uncharacterized LOC107828516

aminoacylase-1-like

uncharacterized LOC4346012

uncharacterized LOC4340457

uncharacterized LOC100283955

aminoacylase-1

aminoacylase-1-like

aminoacylase-1

uncharacterized protein

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	4
ghi01210	2-Oxocarboxylic acid metabolism	4
ghi01230	Biosynthesis of amino acids	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00220	Arginine biosynthesis	8
ghi01210	2-Oxocarboxylic acid metabolism	8
ghi01230	Biosynthesis of amino acids	8

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath00190	Oxidative phosphorylation	6
ath00920	Sulfur metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00220	Arginine biosynthesis	2
bra01210	2-Oxocarboxylic acid metabolism	2
bra01230	Biosynthesis of amino acids	2
bra00620	Pyruvate metabolism	2
bra01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04142	Lysosome	4
bna00220	Arginine biosynthesis	3
bna01210	2-Oxocarboxylic acid metabolism	3
bna01230	Biosynthesis of amino acids	3
bna04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit01210	2-Oxocarboxylic acid metabolism	3
cit01230	Biosynthesis of amino acids	3
cit00290	Valine, leucine and isoleucine biosynthesis	2
cit00770	Pantothenate and CoA biosynthesis	2
cit03013	Nucleocytoplasmic transport	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00190	Oxidative phosphorylation	6
cit01230	Biosynthesis of amino acids	3
cit01200	Carbon metabolism	2
cit01210	2-Oxocarboxylic acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma03040	Spliceosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi01200	Carbon metabolism	2
vvi04712	Circadian rhythm - plant	2
vvi00730	Thiamine metabolism	2
vvi00480	Glutathione metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo01200	Carbon metabolism	3
ppo00620	Pyruvate metabolism	2
ppo00670	One carbon pool by folate	2
ppo01240	Biosynthesis of cofactors	2
ppo01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	3
mtr00220	Arginine biosynthesis	3
mtr01210	2-Oxocarboxylic acid metabolism	3
mtr01230	Biosynthesis of amino acids	3
mtr01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00410	beta-Alanine metabolism	4
mtr00220	Arginine biosynthesis	3
mtr01210	2-Oxocarboxylic acid metabolism	3
mtr01230	Biosynthesis of amino acids	3
mtr00240	Pyrimidine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00220	Arginine biosynthesis	2
sly01210	2-Oxocarboxylic acid metabolism	2
sly01230	Biosynthesis of amino acids	2
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00220	Arginine biosynthesis	2
sly01210	2-Oxocarboxylic acid metabolism	2
sly01230	Biosynthesis of amino acids	2
sly00190	Oxidative phosphorylation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00190	Oxidative phosphorylation	5
sot01230	Biosynthesis of amino acids	3
sot01200	Carbon metabolism	3
sot04145	Phagosome	2
sot00220	Arginine biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot01230	Biosynthesis of amino acids	5
sot01210	2-Oxocarboxylic acid metabolism	4
sot01200	Carbon metabolism	4
sot00190	Oxidative phosphorylation	4
sot00020	Citrate cycle (TCA cycle)	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	5
nta00220	Arginine biosynthesis	4
nta01210	2-Oxocarboxylic acid metabolism	4
nta01230	Biosynthesis of amino acids	4
nta00071	Fatty acid degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00190	Oxidative phosphorylation	5
nta00280	Valine, leucine and isoleucine degradation	4
nta00220	Arginine biosynthesis	2
nta01210	2-Oxocarboxylic acid metabolism	2
nta01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00220	Arginine biosynthesis	3
osa01210	2-Oxocarboxylic acid metabolism	3
osa01230	Biosynthesis of amino acids	3
osa01200	Carbon metabolism	2
osa00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00220	Arginine biosynthesis	3
osa01210	2-Oxocarboxylic acid metabolism	3
osa01230	Biosynthesis of amino acids	3
osa00190	Oxidative phosphorylation	2
osa00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03010	Ribosome	3
zma01210	2-Oxocarboxylic acid metabolism	2
zma01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00220	Arginine biosynthesis	3
tae01210	2-Oxocarboxylic acid metabolism	3
tae01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae00220	Arginine biosynthesis	5
tae01210	2-Oxocarboxylic acid metabolism	5
tae01230	Biosynthesis of amino acids	5
tae00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00071	Fatty acid degradation	2
hvu00410	beta-Alanine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00040	Pentose and glucuronate interconversions	2
hvu01230	Biosynthesis of amino acids	2
hvu00030	Pentose phosphate pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01230	Biosynthesis of amino acids	3
sbi00220	Arginine biosynthesis	2
sbi01210	2-Oxocarboxylic acid metabolism	2
sbi00190	Oxidative phosphorylation	2
sbi00270	Cysteine and methionine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00190	Oxidative phosphorylation	6
sbi00220	Arginine biosynthesis	2
sbi01210	2-Oxocarboxylic acid metabolism	2
sbi01230	Biosynthesis of amino acids	2
sbi04145	Phagosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre00510	N-Glycan biosynthesis	5
cre00513	Various types of N-glycan biosynthesis	5
cre04141	Protein processing in endoplasmic reticulum	5
cre00020	Citrate cycle (TCA cycle)	3
cre00620	Pyruvate metabolism	3

Expression

Expression pattern

Entrez Gene ID^*

107898901

107944751

829978

103827501

106350870

102622833

102611318

100783172

100817383

100260562

100257526

7463357

18098169

11429277

11437031

101248259

543751

102590216

102593106

107828516

107817856

4346012

4340457

100283955

100282205

123157518

123170358

123408699

123410758

8077344

8055167

100839108

100826836

5727256

5716521

The preparation time of this page was 0.2 [sec].


Species	ghi	ath	gma	vvi	ppo	mtr	sly	osa	zma	hvu	bna	cit	bra	sbi	bdi	nta	tae	cre	sot
Paralog	1	2	2	2	3	3	2	2	3	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 107963849 (ghi-r.1 coexpression data)

Top 50 enrichment test to 107963849 (ghi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**