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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5  109118966  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 sly-r.6  109118966  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 sot-r.1  102589185  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 nta-r.1  107817914  uncharacterized LOC107817914 
 nta-r.1  107791459  uncharacterized LOC107791459 
 nta-r.1  142172757  uncharacterized LOC142172757 
 ath-u.5  AT1G07740  Tetratricopeptide repeat (TPR)-like superfamily protein 
 gma-u.5  100776556  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 bra-r.6  103836421  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 ppo-u.5  7462764  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 mtr-u.5  25492469  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 ghi-r.1  121225376  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 ghi-r.1  107931607  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 bna-r.1  106362260  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 cit-r.1  102618950  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 osa-u.5  107277454  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 osa-u.5  4339513  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 zma-u.5  100501610  uncharacterized LOC100501610 
 tae-r.2  123174826  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 tae-r.2  123143388  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 tae-r.2  123180427  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 
 hvu-r.1  123416911  pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like 
 bdi-r.1  100824978  pentatricopeptide repeat-containing protein At1g07740, mitochondrial 

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Top 50 coexpressed genes to 109118966 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109118966 (sly-u.5 coexpression data)

CoexMap"109118966"


slyLOC109118966 | Entrez gene ID : 109118966
Species sly sot nta ath gma bra ppo mtr ghi bna cit osa zma tae hvu bdi vvi cre sbi
Paralog 2 1 3 1 1 1 1 1 2 1 1 2 1 3 1 1 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0005515 [list] [network] protein binding  (3982 genes)  IEA  
Protein XP_019066552.2 [sequence] [blastp]
Subcellular
localization
wolf
chlo 7,  nucl 1,  mito 1  (predict for XP_019066552.2)
Subcellular
localization
TargetP
mito 7,  chlo 3  (predict for XP_019066552.2)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID
Other ID Link Target Reference

sly-u.5
for
109118966


sly-r.6
for
109118966


sot-r.1
for
102589185


nta-r.1
for
107817914


nta-r.1
for
107791459


nta-r.1
for
142172757


ath-u.5
for
AT1G07740


gma-u.5
for
100776556


bra-r.6
for
103836421


ppo-u.5
for
7462764


mtr-u.5
for
25492469


ghi-r.1
for
121225376


ghi-r.1
for
107931607


bna-r.1
for
106362260


cit-r.1
for
102618950


osa-u.5
for
107277454


osa-u.5
for
4339513


zma-u.5
for
100501610


tae-r.2
for
123174826


tae-r.2
for
123143388


tae-r.2
for
123180427


hvu-r.1
for
123416911


bdi-r.1
for
100824978



Ortholog ID: 9202
Species sly sot nta nta nta ath gma bra ppo mtr ghi ghi bna cit osa osa zma tae tae tae hvu bdi
Symbol LOC109118966 LOC102589185 LOC107817914 LOC107791459 LOC142172757 AT1G07740 LOC100776556 LOC103836421 LOC7462764 LOC25492469 LOC121225376 LOC107931607 LOC106362260 LOC102618950 LOC107277454 LOC4339513 LOC100501610 LOC123174826 LOC123143388 LOC123180427 LOC123416911 LOC100824978
Function* pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial uncharacterized LOC107817914 uncharacterized LOC107791459 uncharacterized LOC142172757 Tetratricopeptide repeat (TPR)-like superfamily protein pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial uncharacterized LOC100501610 pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial pentatricopeptide repeat-containing protein At1g07740, mitochondrial-like pentatricopeptide repeat-containing protein At1g07740, mitochondrial
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00770 Pantothenate and CoA biosynthesis 2
mtr01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae00906 Carotenoid biosynthesis 3
tae03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03008 Ribosome biogenesis in eukaryotes 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03010 Ribosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109118966 102589185 107817914 107791459 142172757 837288 100776556 103836421 7462764 25492469 121225376 107931607 106362260 102618950 107277454 4339513 100501610 123174826 123143388 123180427 123416911 100824978
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