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Orthologous genes in OrthoFinder**

Species Gene Description
 sly-u.5   109120159   calvin cycle protein CP12-3, chloroplastic 
 sly-r.6   109120159   calvin cycle protein CP12-3, chloroplastic 
 ath-u.5   CP12-3   CP12 domain-containing protein 3 
 vvi-u.5   100251226   calvin cycle protein CP12-3, chloroplastic 
 ppo-u.5   7471735   calvin cycle protein CP12-3, chloroplastic 
 osa-u.5   9268681   calvin cycle protein CP12-3, chloroplastic 

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Top 50 coexpressed genes to 109120159 (sly-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 109120159 (sly-u.5 coexpression data)

CoexMap"109120159"


slyLOC109120159 | Entrez gene ID : 109120159    
Species sly ath vvi ppo osa hvu zma bna cit bra ghi mtr sbi bdi nta gma tae cre sot
Paralog 2 1 1 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0080153 [list] [network] negative regulation of reductive pentose-phosphate cycle  (3 genes)  IEA  
GO CC
GO:0009507 [list] [network] chloroplast  (632 genes)  IEA  
GO MF
Protein XP_019069278.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 8,  extr 1  (predict for XP_019069278.1)
Subcellular
localization
TargetP
chlo 5  (predict for XP_019069278.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sly-u.5
for
109120159
sly-r.6
for
109120159
ath-u.5
for
CP12-3
vvi-u.5
for
100251226
ppo-u.5
for
7471735
osa-u.5
for
9268681


Ortholog ID: 13487
Species sly sot ath bra vvi ppo ghi ghi bna bna osa sbi
Symbol LOC109120159 LOC102589731 CP12-3 LOC103832119 LOC100251226 LOC7471735 LOC107915278 LOC107904800 LOC106421573 LOC106427310 LOC9268681 LOC8057901
Function* calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic CP12 domain-containing protein 3 calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic calvin cycle protein CP12-3, chloroplastic
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04120 Ubiquitin mediated proteolysis 5
sot03083 Polycomb repressive complex 2
sot04141 Protein processing in endoplasmic reticulum 2
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath00966 Glucosinolate biosynthesis 3
ath00380 Tryptophan metabolism 2
ath01210 2-Oxocarboxylic acid metabolism 2
ath00230 Purine metabolism 2
ath00920 Sulfur metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04141 Protein processing in endoplasmic reticulum 4
bra04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo00510 N-Glycan biosynthesis 2
ppo00513 Various types of N-glycan biosynthesis 2
ppo04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi00195 Photosynthesis 7
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna04016 MAPK signaling pathway - plant 3
bna04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04141 Protein processing in endoplasmic reticulum 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi00500 Starch and sucrose metabolism 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 109120159 102589731 843989 103832119 100251226 7471735 107915278 107904800 106421573 106427310 9268681 8057901
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