ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
zma-u.5	109611595	uncharacterized LOC109611595
zma-r.6	109611595	uncharacterized LOC109611595
zma-u.5	100274734	putative thaumatin domain family protein
zma-u.5	100276695	Osmotin-like protein OSM34
zma-u.5	542299	stress-induced protein 1
sbi-r.1	110431933	thaumatin-like protein 1b
sbi-r.1	8055281	pathogenesis-related protein
sbi-r.1	8078857	thaumatin-like protein 1b
osa-u.5	9272385	thaumatin-like protein 1
osa-u.5	4332228	thaumatin-like protein 1b
tae-r.2	123123453	thaumatin-like protein 1b
hvu-r.1	123400149	thaumatin-like protein 1
hvu-r.1	123398980	alpha-amylase/trypsin inhibitor-like
hvu-r.1	123398521	thaumatin-like protein
bdi-r.1	100821468	thaumatin-like protein 1b
ath-u.5	AT4G36010	Pathogenesis-related thaumatin superfamily protein
ath-u.5	AT4G38660	Pathogenesis-related thaumatin superfamily protein
gma-u.5	100808342	thaumatin-like protein 1
gma-u.5	100808305	pathogenesis-related thaumatin-like protein 3.5
sly-u.5	101264452	osmotin-like protein OSML13
sly-u.5	101264959	pathogenesis-related protein PR-5
bra-r.6	103852929	pathogenesis-related protein 5
bra-r.6	103872728	pathogenesis-related protein 5
bra-r.6	103852981	thaumatin-like protein 1b
ppo-u.5	18094931	thaumatin-like protein 1
ppo-u.5	7479328	osmotin-like protein OSM34
ppo-u.5	7477685	thaumatin-like protein 1
mtr-u.5	11436800	protein P21
mtr-u.5	11428091	thaumatin-like protein 1
ghi-r.1	107916993	thaumatin-like protein 1b
ghi-r.1	107912820	thaumatin-like protein 1
ghi-r.1	107912819	pathogenesis-related thaumatin-like protein 3.5
bna-r.1	106362334	pathogenesis-related protein 5
bna-r.1	125604012	thaumatin-like protein 1
bna-r.1	125587410	pathogenesis-related protein 5-like
sot-r.1	102590933	thaumatin-like protein 1b
sot-r.1	102591283	thaumatin-like protein 1
cit-r.1	102610623	thaumatin-like protein 1
cit-r.1	102609374	thaumatin-like protein 1b
nta-r.1	107774057	thaumatin-like protein
nta-r.1	107818196	thaumatin-like protein 1
nta-r.1	107828042	thaumatin-like protein 1b

Top 50 coexpressed genes to 109611595 (zma-u.5 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 109611595 (zma-u.5 coexpression data)

CoexMap"109611595"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

NP_001335275.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 8, nucl 1, mito 1, extr 1

(predict for NP_001335275.1)

Subcellular
localization
TargetP

mito 3

(predict for NP_001335275.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target		Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	zma-u.5 for 109611595	zma-r.6 for 109611595	zma-u.5 for 100274734	zma-u.5 for 100276695	zma-u.5 for 542299	sbi-r.1 for 110431933	sbi-r.1 for 8055281	sbi-r.1 for 8078857	osa-u.5 for 9272385	osa-u.5 for 4332228	tae-r.2 for 123123453	hvu-r.1 for 123400149	hvu-r.1 for 123398980	hvu-r.1 for 123398521	bdi-r.1 for 100821468	ath-u.5 for AT4G36010	ath-u.5 for AT4G38660	gma-u.5 for 100808342	gma-u.5 for 100808305	sly-u.5 for 101264452	sly-u.5 for 101264959	bra-r.6 for 103852929	bra-r.6 for 103872728	bra-r.6 for 103852981	ppo-u.5 for 18094931	ppo-u.5 for 7479328	ppo-u.5 for 7477685	mtr-u.5 for 11436800	mtr-u.5 for 11428091	ghi-r.1 for 107916993	ghi-r.1 for 107912820	ghi-r.1 for 107912819	bna-r.1 for 106362334	bna-r.1 for 125604012	bna-r.1 for 125587410	sot-r.1 for 102590933	sot-r.1 for 102591283	cit-r.1 for 102610623	cit-r.1 for 102609374	nta-r.1 for 107774057	nta-r.1 for 107818196	nta-r.1 for 107828042

Ortholog

Ortholog ID: 30

Species

zma

sbi

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

TLP-3

Function^*

putative thaumatin domain family protein

Protein P21

protein P21

thaumatin-like protein 1b

thaumatin-like protein 1

pathogenesis-related 5 protein Cup a 3-like

thaumatin-like protein 1

Pathogenesis-related thaumatin superfamily protein

thaumatin-like protein 3

thaumatin-like protein 1

thaumatin-like protein

pathogenesis-related thaumatin-like protein 3.5

thaumatin-like protein 1b

thaumatin-like protein 1

thaumatin-like protein 1b

thaumatin-like protein

osmotin-like protein OSM34

thaumatin-like protein 1

thaumatin-like protein 1b

protein P21

thaumatin-like protein 1

thaumatin-like protein 1b

thaumatin-like protein

protein P21

pathogenesis-related protein 5-like

thaumatin-like protein 1

osmotin-like protein OSML81

pathogenesis-related protein R major form

thaumatin-like protein 1b

thaumatin-like protein 1

protein P21-like

pathogenesis-related protein R major form

protein P21

pathogenesis-related thaumatin-like protein 3.5

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	3
zma00520	Amino sugar and nucleotide sugar metabolism	3
zma04075	Plant hormone signal transduction	2
zma04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma00909	Sesquiterpenoid and triterpenoid biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	9

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04016	MAPK signaling pathway - plant	6
hvu04075	Plant hormone signal transduction	5
hvu04626	Plant-pathogen interaction	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00520	Amino sugar and nucleotide sugar metabolism	2
sly04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00190	Oxidative phosphorylation	3
sly04142	Lysosome	3
sly04145	Phagosome	3
sly04144	Endocytosis	2
sly04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00909	Sesquiterpenoid and triterpenoid biosynthesis	5
vvi00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi04016	MAPK signaling pathway - plant	4
vvi04626	Plant-pathogen interaction	4
vvi00520	Amino sugar and nucleotide sugar metabolism	3
vvi00480	Glutathione metabolism	3
vvi04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04016	MAPK signaling pathway - plant	4
ppo00480	Glutathione metabolism	3
ppo00520	Amino sugar and nucleotide sugar metabolism	2
ppo04075	Plant hormone signal transduction	2
ppo00901	Indole alkaloid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00520	Amino sugar and nucleotide sugar metabolism	2
ghi04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot04016	MAPK signaling pathway - plant	3
sot04075	Plant hormone signal transduction	3
sot04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00520	Amino sugar and nucleotide sugar metabolism	2
sot04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04626	Plant-pathogen interaction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04016	MAPK signaling pathway - plant	8
nta04626	Plant-pathogen interaction	7
nta04075	Plant hormone signal transduction	6
nta00520	Amino sugar and nucleotide sugar metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00904	Diterpenoid biosynthesis	2
nta00190	Oxidative phosphorylation	2

Expression

Expression pattern

Entrez Gene ID^*

100274734

100281135

103626019

8078857

4347700

123160584

123395625

100841264

829757

843841

100815652

104645134

101261870

103844371

103860762

100264253

100259841

100249610

7479328

7470389

7490640

11436800

25492788

25492789

121203468

107947008

106449414

106355231

102585092

102594304

102622492

102622795

102621968

107776518

107805712

107807243

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Species	zma	sbi	osa	tae	hvu	bdi	ath	gma	sly	bra	ppo	mtr	ghi	bna	sot	cit	nta	vvi	cre
Paralog	5	3	2	1	3	1	2	2	2	3	3	2	3	3	2	2	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 109611595 (zma-u.5 coexpression data)

Top 50 enrichment test to 109611595 (zma-u.5 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**