ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
sbi-r.1	110429591	translation initiation factor IF-2-like
sbi-r.1	8085630	uncharacterized LOC8085630
sbi-r.1	8055256	uncharacterized LOC8055256
zma-u.5	100193010	uncharacterized LOC100193010
zma-u.5	100193422	uncharacterized LOC100193422
zma-u.5	103651103	uncharacterized LOC103651103
osa-u.5	9269556	uncharacterized LOC9269556
osa-u.5	107277791	uncharacterized LOC107277791
osa-u.5	4327962	uncharacterized LOC4327962
tae-r.2	123079452	uncharacterized LOC123079452
tae-r.2	123103061	uncharacterized LOC123103061
tae-r.2	123071086	uncharacterized LOC123071086
hvu-r.1	123444622	uncharacterized LOC123444622
hvu-r.1	123396528	uncharacterized LOC123396528
bdi-r.1	100838767	bifunctional endo-1,4-beta-xylanase XylA
bdi-r.1	100834260	trinucleotide repeat-containing gene 6B protein
ath-u.5	AT3G51940	oxidoreductase/transition metal ion-binding protein
ath-u.5	AT5G03990	FK506-binding-like protein
gma-u.5	100797066	uncharacterized LOC100797066
gma-u.5	100794939	uncharacterized LOC100794939
gma-u.5	100775807	uncharacterized LOC100775807
sly-u.5	104647318	uncharacterized LOC104647318
bra-r.6	103841131	uncharacterized LOC103841131
bra-r.6	103847342	uncharacterized LOC103847342
vvi-u.5	100241733	uncharacterized LOC100241733
ppo-u.5	18094321	uncharacterized LOC18094321
ppo-u.5	7483962	uncharacterized LOC7483962
ppo-u.5	7473593	uncharacterized LOC7473593
mtr-u.5	11420156	uncharacterized LOC11420156
mtr-u.5	25499011	uncharacterized LOC25499011
mtr-u.5	11415354	uncharacterized LOC11415354
ghi-r.1	107936331	uncharacterized LOC107936331
ghi-r.1	107933297	uncharacterized LOC107933297
bna-r.1	106433835	uncharacterized LOC106433835
bna-r.1	106402757	uncharacterized LOC106402757
bna-r.1	106372663	uncharacterized LOC106372663
sot-r.1	102592317	protein RNA-directed DNA methylation 3
cit-r.1	102616074	uncharacterized LOC102616074
cit-r.1	102616992	uncharacterized LOC102616992
nta-r.1	107824983	uncharacterized LOC107824983
nta-r.1	107800253	uncharacterized LOC107800253

Top 50 coexpressed genes to 110429591 (sbi-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 110429591 (sbi-r.1 coexpression data)

CoexMap"110429591"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_021301412.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 5, cyto 4

(predict for XP_021301412.1)

Subcellular
localization
TargetP

other 5

(predict for XP_021301412.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 110429591	sbi-r.1 for 8085630	sbi-r.1 for 8055256	zma-u.5 for 100193010	zma-u.5 for 100193422	zma-u.5 for 103651103	osa-u.5 for 9269556	osa-u.5 for 107277791	osa-u.5 for 4327962	tae-r.2 for 123079452	tae-r.2 for 123103061	tae-r.2 for 123071086	hvu-r.1 for 123444622	hvu-r.1 for 123396528	bdi-r.1 for 100838767	bdi-r.1 for 100834260	ath-u.5 for AT3G51940	ath-u.5 for AT5G03990	gma-u.5 for 100797066	gma-u.5 for 100794939	gma-u.5 for 100775807	sly-u.5 for 104647318	bra-r.6 for 103841131	bra-r.6 for 103847342	vvi-u.5 for 100241733	ppo-u.5 for 18094321	ppo-u.5 for 7483962	ppo-u.5 for 7473593	mtr-u.5 for 11420156	mtr-u.5 for 25499011	mtr-u.5 for 11415354	ghi-r.1 for 107936331	ghi-r.1 for 107933297	bna-r.1 for 106433835	bna-r.1 for 106402757	bna-r.1 for 106372663	sot-r.1 for 102592317	cit-r.1 for 102616074	cit-r.1 for 102616992	nta-r.1 for 107824983	nta-r.1 for 107800253

Ortholog

Ortholog ID: 2227

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

Function^*

translation initiation factor IF-2-like

uncharacterized LOC8085630

uncharacterized LOC103651103

uncharacterized LOC103651662

uncharacterized LOC100277297

uncharacterized LOC9269556

uncharacterized LOC107277791

uncharacterized LOC4327962

uncharacterized LOC123079452

uncharacterized LOC123111237

uncharacterized LOC123062319

uncharacterized LOC123444622

uncharacterized LOC123396528

bifunctional endo-1,4-beta-xylanase XylA

trinucleotide repeat-containing gene 6B protein

oxidoreductase/transition metal ion-binding protein

FK506-binding-like protein

uncharacterized LOC100794939

uncharacterized LOC100775807

bifunctional endo-1,4-beta-xylanase XylA

uncharacterized LOC104647318

uncharacterized LOC103841131

uncharacterized LOC103847342

uncharacterized LOC100241733

uncharacterized LOC7483962

uncharacterized LOC7473593

uncharacterized LOC11415354

uncharacterized LOC11415353

uncharacterized LOC11443723

uncharacterized LOC107936331

uncharacterized LOC107933297

uncharacterized LOC106433835

uncharacterized LOC106372663

uncharacterized LOC106367864

protein RNA-directed DNA methylation 3

uncharacterized LOC102616074

uncharacterized LOC102616992

uncharacterized LOC107824983

uncharacterized LOC107800253

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03010	Ribosome	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03040	Spliceosome	2
sbi03008	Ribosome biogenesis in eukaryotes	2
sbi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00906	Carotenoid biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	4
tae04144	Endocytosis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae03050	Proteasome	3
tae04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04130	SNARE interactions in vesicular transport	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu04144	Endocytosis	2
hvu04145	Phagosome	2
hvu04148	Efferocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath04141	Protein processing in endoplasmic reticulum	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00280	Valine, leucine and isoleucine degradation	3
gma04146	Peroxisome	2
gma00260	Glycine, serine and threonine metabolism	2
gma01230	Biosynthesis of amino acids	2
gma00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04130	SNARE interactions in vesicular transport	2
gma00450	Selenocompound metabolism	2
gma04145	Phagosome	2
gma04517	IgSF CAM signaling	2
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	4
bra03015	mRNA surveillance pathway	3
bra03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03040	Spliceosome	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr04075	Plant hormone signal transduction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00500	Starch and sucrose metabolism	4
ghi04016	MAPK signaling pathway - plant	3
ghi04075	Plant hormone signal transduction	3
ghi00440	Phosphonate and phosphinate metabolism	2
ghi00564	Glycerophospholipid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	4
bna04075	Plant hormone signal transduction	2
bna03022	Basal transcription factors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03040	Spliceosome	6

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit00460	Cyanoamino acid metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03015	mRNA surveillance pathway	2
cit04712	Circadian rhythm - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03040	Spliceosome	5

Expression

Expression pattern

Entrez Gene ID^*

110429591

8085630

103651103

103651662

100277297

9269556

107277791

4327962

123079452

123111237

123062319

123444622

123396528

100838767

100834260

824357

830278

100794939

100775807

102664732

104647318

103841131

103847342

100241733

7483962

7473593

11415354

11415353

11443723

107936331

107933297

106433835

106372663

106367864

102592317

102616074

102616992

107824983

107800253

The preparation time of this page was 0.1 [sec].


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	vvi	ppo	mtr	ghi	bna	sot	cit	nta	cre
Paralog	3	3	3	3	2	2	2	3	1	2	1	3	3	2	3	1	2	2	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 110429591 (sbi-r.1 coexpression data)

Top 50 enrichment test to 110429591 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**