Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110430686   putative clathrin assembly protein At5g35200 
 zma-u.5   100383870   Putative clathrin assembly protein 
 zma-u.5   103654165   putative clathrin assembly protein At5g35200 
 zma-u.5   103638005   putative clathrin assembly protein At5g35200 
 osa-u.5   4323889   putative clathrin assembly protein At2g01600 
 osa-u.5   4328473   putative clathrin assembly protein At5g57200 
 osa-u.5   4331047   putative clathrin assembly protein At5g35200 
 ath-u.5   AT2G01600   ENTH/ANTH/VHS superfamily protein 
 ath-u.5   AT4G25940   ENTH/ANTH/VHS superfamily protein 
 ath-u.5   AT5G35200   ENTH/ANTH/VHS superfamily protein 
 gma-u.5   100818165   putative clathrin assembly protein At5g57200 
 gma-u.5   100815975   putative clathrin assembly protein At4g25940 
 gma-u.5   100815239   putative clathrin assembly protein At5g35200 
 sly-u.5   101055517   Hop-interacting protein THI028 
 sly-u.5   101261179   putative clathrin assembly protein At5g57200 
 vvi-u.5   100243252   putative clathrin assembly protein At5g35200 
 vvi-u.5   100252433   putative clathrin assembly protein At5g35200 
 ppo-u.5   7459869   putative clathrin assembly protein At5g35200 
 ppo-u.5   7485503   putative clathrin assembly protein At5g57200 
 ppo-u.5   7482894   putative clathrin assembly protein At2g01600 
 mtr-u.5   120577402   putative clathrin assembly protein At2g01600 
 mtr-u.5   11438799   putative clathrin assembly protein At5g35200 

close


Top 50 coexpressed genes to 110430686 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 110430686 (sbi-r.1 coexpression data)

CoexMap"110430686"


sbiLOC110430686 | Entrez gene ID : 110430686    
Species sbi zma osa ath gma sly vvi ppo mtr bra nta cre hvu cit bdi sot tae bna ghi
Paralog 1 3 3 3 3 2 2 3 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0048268 [list] [network] clathrin coat assembly  (18 genes)  IEA  
GO:0072583 [list] [network] clathrin-dependent endocytosis  (27 genes)  IEA  
GO:0006900 [list] [network] vesicle budding from membrane  (45 genes)  IEA  
GO CC
GO:0005905 [list] [network] clathrin-coated pit  (23 genes)  IEA  
GO:0030136 [list] [network] clathrin-coated vesicle  (34 genes)  IEA  
GO MF
GO:0005545 [list] [network] 1-phosphatidylinositol binding  (15 genes)  IEA  
GO:0032050 [list] [network] clathrin heavy chain binding  (18 genes)  IEA  
GO:0005546 [list] [network] phosphatidylinositol-4,5-bisphosphate binding  (45 genes)  IEA  
GO:0000149 [list] [network] SNARE binding  (66 genes)  IEA  
Protein XP_021304165.1 [sequence] [blastp]
XP_021304166.1 [sequence] [blastp]
XP_021304167.1 [sequence] [blastp]
XP_021304168.1 [sequence] [blastp]
Subcellular
localization
wolf
cyto 5,  mito 3,  cyto_pero 3  (predict for XP_021304165.1)
cyto 5,  mito 3,  cyto_pero 3  (predict for XP_021304166.1)
cyto 5,  mito 3,  cyto_pero 3  (predict for XP_021304167.1)
cyto 5,  mito 3,  cyto_pero 3  (predict for XP_021304168.1)
Subcellular
localization
TargetP
other 8,  mito 5  (predict for XP_021304165.1)
other 8,  mito 5  (predict for XP_021304166.1)
other 8,  mito 5  (predict for XP_021304167.1)
other 8,  mito 5  (predict for XP_021304168.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110430686

.
zma-u.5
for
100383870

.
zma-u.5
for
103654165

.
zma-u.5
for
103638005

.
osa-u.5
for
4323889

.
osa-u.5
for
4328473

.
osa-u.5
for
4331047

.
ath-u.5
for
AT2G01600

.
ath-u.5
for
AT4G25940

.
ath-u.5
for
AT5G35200

.
gma-u.5
for
100818165

.
gma-u.5
for
100815975

.
gma-u.5
for
100815239

.
sly-u.5
for
101055517

.
sly-u.5
for
101261179

.
vvi-u.5
for
100243252

.
vvi-u.5
for
100252433

.
ppo-u.5
for
7459869

.
ppo-u.5
for
7485503

.
ppo-u.5
for
7482894

.
mtr-u.5
for
120577402

.
mtr-u.5
for
11438799

.


Ortholog ID: 429
Species ath ath gma gma sly osa osa zma zma bra vvi vvi ppo ppo mtr tae tae ghi bna cre sbi cit cit bdi bdi nta
Symbol AT4G25940 AT2G01600 LOC100794160 LOC100815975 LOC101055517 LOC4328473 LOC4331047 LOC103654165 LOC100217151 LOC103872283 LOC100252433 LOC100243252 LOC7482894 LOC7459869 LOC120577402 LOC123149316 LOC123145993 LOC121216000 LOC106376717 CHLRE_09g393136v5 LOC8056401 LOC102618386 LOC102619196 LOC100827676 LOC100841026 LOC107815224
Function* ENTH/ANTH/VHS superfamily protein ENTH/ANTH/VHS superfamily protein putative clathrin assembly protein At2g01600 putative clathrin assembly protein At4g25940 Hop-interacting protein THI028 putative clathrin assembly protein At5g57200 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At5g35200 uncharacterized LOC100217151 putative clathrin assembly protein At1g14910 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At5g57200 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At2g01600 uncharacterized protein putative clathrin assembly protein At5g35200 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At5g35200 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At2g01600 putative clathrin assembly protein At5g35200
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 3
ath03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04141 Protein processing in endoplasmic reticulum 2
ath04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00564 Glycerophospholipid metabolism 3
gma03018 RNA degradation 2
gma00592 alpha-Linolenic acid metabolism 2
gma04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04075 Plant hormone signal transduction 2
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 4
osa00400 Phenylalanine, tyrosine and tryptophan biosynthesis 2
osa01230 Biosynthesis of amino acids 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04075 Plant hormone signal transduction 3
zma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03015 mRNA surveillance pathway 2
bra04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03083 Polycomb repressive complex 4
ppo04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04142 Lysosome 5
ppo04144 Endocytosis 5
ppo05100 Bacterial invasion of epithelial cells 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04814 Motor proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03013 Nucleocytoplasmic transport 2
ghi00511 Other glycan degradation 2
ghi00600 Sphingolipid metabolism 2
ghi04382 Cornified envelope formation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
cit04141 Protein processing in endoplasmic reticulum 3
cit03013 Nucleocytoplasmic transport 2
cit04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00513 Various types of N-glycan biosynthesis 2
cit04141 Protein processing in endoplasmic reticulum 2
cit00020 Citrate cycle (TCA cycle) 2
cit01200 Carbon metabolism 2
cit04130 SNARE interactions in vesicular transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 4
bdi04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00906 Carotenoid biosynthesis 2
nta00770 Pantothenate and CoA biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 828700 814689 100794160 100815975 101055517 4328473 4331047 103654165 100217151 103872283 100252433 100243252 7482894 7459869 120577402 123149316 123145993 121216000 106376717 5720266 8056401 102618386 102619196 100827676 100841026 107815224
The preparation time of this page was 0.2 [sec].