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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110431252   E3 ubiquitin-protein ligase RLIM-like 
 zma-u.5   100283924   uncharacterized LOC100283924 
 zma-u.5   103627863   RING/U-box superfamily protein 
 osa-u.5   4331022   uncharacterized LOC4331022 
 osa-u.5   4340307   receptor homology region, transmembrane domain- and RING domain-containing protein 6 
 ath-u.5   AT2G15580   RING/U-box superfamily protein 
 gma-u.5   100790524   probable E3 ubiquitin-protein ligase RHY1A 
 gma-u.5   100527583   uncharacterized LOC100527583 
 gma-u.5   100500350   uncharacterized LOC100500350 
 sly-u.5   101250706   probable E3 ubiquitin-protein ligase RHY1A 
 vvi-u.5   100241393   probable E3 ubiquitin-protein ligase RHY1A 
 ppo-u.5   7470041   probable E3 ubiquitin-protein ligase RHY1A 
 mtr-u.5   25488383   probable E3 ubiquitin-protein ligase RHY1A 

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Top 50 coexpressed genes to 110431252 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110431252 (sbi-r.1 coexpression data)

CoexMap"110431252"


sbiLOC110431252 | Entrez gene ID : 110431252    
Species sbi zma osa ath gma sly vvi ppo mtr sot hvu tae cit ghi cre bna nta bdi bra
Paralog 1 2 2 1 3 1 1 1 1 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006511 [list] [network] ubiquitin-dependent protein catabolic process  (251 genes)  IEA  
GO CC
GO MF
GO:0061630 [list] [network] ubiquitin protein ligase activity  (192 genes)  IEA  
Protein XP_021305815.1 [sequence] [blastp]
XP_021305816.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 8,  chlo 1  (predict for XP_021305815.1)
nucl 7,  chlo 2  (predict for XP_021305816.1)
Subcellular
localization
TargetP
mito 7,  other 3  (predict for XP_021305815.1)
mito 7,  other 4  (predict for XP_021305816.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110431252

.
zma-u.5
for
100283924

.
zma-u.5
for
103627863

.
osa-u.5
for
4331022

.
osa-u.5
for
4340307

.
ath-u.5
for
AT2G15580

.
gma-u.5
for
100790524

.
gma-u.5
for
100527583

.
gma-u.5
for
100500350

.
sly-u.5
for
101250706

.
vvi-u.5
for
100241393

.
ppo-u.5
for
7470041

.
mtr-u.5
for
25488383

.


Ortholog ID: 3901
Species ath gma gma sly osa osa zma zma bra vvi ppo mtr tae hvu hvu ghi ghi bna bna sbi sbi sot sot cit bdi bdi nta nta
Symbol AT2G15580 LOC100500350 LOC100527583 LOC101250706 LOC4331022 LOC4340307 LOC100283924 LOC103627863 LOC103844355 LOC100241393 LOC7470041 LOC25488383 LOC123165795 LOC123412783 LOC123402617 LOC121225243 LOC107962551 LOC106361630 LOC106445638 LOC110431252 LOC8056392 LOC102590358 LOC102590705 LOC102616965 LOC100830912 LOC100833275 LOC107801626 LOC107759976
Function* RING/U-box superfamily protein uncharacterized LOC100500350 uncharacterized LOC100527583 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC4331022 receptor homology region, transmembrane domain- and RING domain-containing protein 6 uncharacterized LOC100283924 RING/U-box superfamily protein probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase Iruka E3 ubiquitin-protein ligase TTC3-like uncharacterized LOC123402617 E3 ubiquitin-protein ligase ZNRF3 uncharacterized LOC107962551 probable E3 ubiquitin-protein ligase RHY1A probable E3 ubiquitin-protein ligase RHY1A E3 ubiquitin-protein ligase RLIM-like RING-H2 finger protein ATL80 E3 ubiquitin-protein ligase RING1-like uncharacterized LOC102590705 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC100830912 probable E3 ubiquitin-protein ligase RHY1A uncharacterized LOC107801626 uncharacterized LOC107759976
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04626 Plant-pathogen interaction 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00196 Photosynthesis - antenna proteins 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00195 Photosynthesis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04626 Plant-pathogen interaction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04070 Phosphatidylinositol signaling system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04626 Plant-pathogen interaction 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit01200 Carbon metabolism 4
cit00630 Glyoxylate and dicarboxylate metabolism 3
cit00710 Carbon fixation by Calvin cycle 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04626 Plant-pathogen interaction 3
nta04016 MAPK signaling pathway - plant 2
nta04070 Phosphatidylinositol signaling system 2
nta04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00130 Ubiquinone and other terpenoid-quinone biosynthesis 2
nta01240 Biosynthesis of cofactors 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816051 100500350 100527583 101250706 4331022 4340307 100283924 103627863 103844355 100241393 7470041 25488383 123165795 123412783 123402617 121225243 107962551 106361630 106445638 110431252 8056392 102590358 102590705 102616965 100830912 100833275 107801626 107759976
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