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Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110433578   probable dual-specificity RNA methyltransferase RlmN 
 zma-u.5   100193530   Radical SAM superfamily protein 
 osa-u.5   4326401   uncharacterized LOC4326401 
 tae-r.2   123072851   probable dual-specificity RNA methyltransferase RlmN 
 tae-r.2   123081007   probable dual-specificity RNA methyltransferase RlmN 
 tae-r.2   123063699   probable dual-specificity RNA methyltransferase RlmN 
 hvu-r.1   123445705   probable dual-specificity RNA methyltransferase RlmN 
 bdi-r.1   100833160   probable dual-specificity RNA methyltransferase RlmN 
 ath-u.5   AT2G39670   Radical SAM superfamily protein 
 gma-u.5   100818638   probable dual-specificity RNA methyltransferase RlmN 
 gma-u.5   100801657   probable dual-specificity RNA methyltransferase RlmN 
 sly-u.5   101253790   uncharacterized LOC101253790 
 bra-r.6   103867024   probable dual-specificity RNA methyltransferase RlmN 
 vvi-u.5   100241081   uncharacterized LOC100241081 
 ppo-u.5   7467549   uncharacterized LOC7467549 
 mtr-u.5   11427515   probable dual-specificity RNA methyltransferase RlmN 
 ghi-r.1   107904126   probable dual-specificity RNA methyltransferase RlmN 
 ghi-r.1   107897305   probable dual-specificity RNA methyltransferase RlmN 
 bna-r.1   106451011   probable dual-specificity RNA methyltransferase RlmN 
 bna-r.1   106396811   probable dual-specificity RNA methyltransferase RlmN 
 sot-r.1   102604953   probable dual-specificity RNA methyltransferase RlmN 
 cit-r.1   102625760   uncharacterized LOC102625760 
 nta-r.1   107810882   uncharacterized LOC107810882 
 nta-r.1   107814127   uncharacterized LOC107814127 
 cre-r.1   CHLRE_01g043000v5   uncharacterized protein 

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Top 50 coexpressed genes to 110433578 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 110433578 (sbi-r.1 coexpression data)

CoexMap"110433578"


sbiLOC110433578 | Entrez gene ID : 110433578    
Species sbi zma osa tae hvu bdi ath gma sly bra vvi ppo mtr ghi bna sot cit nta cre
Paralog 1 1 1 3 1 1 1 2 1 1 1 1 1 2 2 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0070475 [list] [network] rRNA base methylation  (18 genes)  IEA  
GO:0030488 [list] [network] tRNA methylation  (24 genes)  IEA  
GO CC
GO MF
GO:0008173 [list] [network] RNA methyltransferase activity  (53 genes)  IEA  
GO:0051536 [list] [network] iron-sulfur cluster binding  (86 genes)  IEA  
Protein XP_021311667.1 [sequence] [blastp]
Subcellular
localization
wolf
chlo 6,  mito 3,  cyto_mito 2  (predict for XP_021311667.1)
Subcellular
localization
TargetP
mito 5,  chlo 4  (predict for XP_021311667.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110433578
zma-u.5
for
100193530
osa-u.5
for
4326401
tae-r.2
for
123072851
tae-r.2
for
123081007
tae-r.2
for
123063699
hvu-r.1
for
123445705
bdi-r.1
for
100833160
ath-u.5
for
AT2G39670
gma-u.5
for
100818638
gma-u.5
for
100801657
sly-u.5
for
101253790
bra-r.6
for
103867024
vvi-u.5
for
100241081
ppo-u.5
for
7467549
mtr-u.5
for
11427515
ghi-r.1
for
107904126
ghi-r.1
for
107897305
bna-r.1
for
106451011
bna-r.1
for
106396811
sot-r.1
for
102604953
cit-r.1
for
102625760
nta-r.1
for
107810882
nta-r.1
for
107814127
cre-r.1
for
CHLRE_01g043000v5


Ortholog ID: 10034
Species sbi zma osa tae tae tae hvu bdi ath gma gma sly bra vvi ppo mtr ghi ghi bna bna sot cit nta nta cre
Symbol LOC110433578 LOC100193530 LOC4326401 LOC123072851 LOC123081007 LOC123063699 LOC123445705 LOC100833160 AT2G39670 LOC100818638 LOC100801657 LOC101253790 LOC103867024 LOC100241081 LOC7467549 LOC11427515 LOC107904126 LOC107897305 LOC106451011 LOC106396811 LOC102604953 LOC102625760 LOC107810882 LOC107814127 CHLRE_01g043000v5
Function* probable dual-specificity RNA methyltransferase RlmN Radical SAM superfamily protein uncharacterized LOC4326401 probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN Radical SAM superfamily protein probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC101253790 probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC100241081 uncharacterized LOC7467549 probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN probable dual-specificity RNA methyltransferase RlmN uncharacterized LOC102625760 uncharacterized LOC107810882 uncharacterized LOC107814127 uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03010 Ribosome 2
sbi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03010 Ribosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03018 RNA degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03010 Ribosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04146 Peroxisome 2
ghi03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 3
bna03410 Base excision repair 3
bna03420 Nucleotide excision repair 3
bna03440 Homologous recombination 3
bna04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03060 Protein export 2
sot00970 Aminoacyl-tRNA biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit00500 Starch and sucrose metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04141 Protein processing in endoplasmic reticulum 2
nta04626 Plant-pathogen interaction 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 110433578 100193530 4326401 123072851 123081007 123063699 123445705 100833160 818550 100818638 100801657 101253790 103867024 100241081 7467549 11427515 107904126 107897305 106451011 106396811 102604953 102625760 107810882 107814127 5715606
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