ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	110434939	probable sodium/metabolite cotransporter BASS4, chloroplastic
zma-u.5	103630751	probable sodium/metabolite cotransporter BASS4, chloroplastic
zma-u.5	100194346	probable sodium/metabolite cotransporter BASS4, chloroplastic
osa-u.5	4329548	probable sodium/metabolite cotransporter BASS4, chloroplastic
ath-u.5	AT3G56160	Sodium Bile acid symporter family
gma-u.5	100779161	probable sodium/metabolite cotransporter BASS4, chloroplastic
sly-u.5	101252502	probable sodium/metabolite cotransporter BASS4, chloroplastic
vvi-u.5	100249899	probable sodium/metabolite cotransporter BASS4, chloroplastic
vvi-u.5	100262186	probable sodium/metabolite cotransporter BASS4, chloroplastic
ppo-u.5	7490902	probable sodium/metabolite cotransporter BASS4, chloroplastic
mtr-u.5	25483251	probable sodium/metabolite cotransporter BASS4, chloroplastic

Annotation

functional annotation

KEGG

GO BP

GO CC

GO:0009941 [list] [network] chloroplast envelope

(98 genes)

IEA

GO MF

Protein

XP_021315674.1 [sequence] [blastp]

Subcellular
localization
wolf

chlo 7, mito 3

(predict for XP_021315674.1)

Subcellular
localization
TargetP

mito 7, chlo 5

(predict for XP_021315674.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 110434939	zma-u.5 for 103630751	zma-u.5 for 100194346	osa-u.5 for 4329548	ath-u.5 for AT3G56160	gma-u.5 for 100779161	sly-u.5 for 101252502	vvi-u.5 for 100249899	vvi-u.5 for 100262186	ppo-u.5 for 7490902	mtr-u.5 for 25483251

Ortholog

Ortholog ID: 8056

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

vvi

ppo

mtr

ghi

bna

sot

cit

nta

cre

Symbol

Function^*

probable sodium/metabolite cotransporter BASS4, chloroplastic

Sodium Bile acid symporter family

probable sodium/metabolite cotransporter BASS4, chloroplastic

putative sodium/metabolite cotransporter BASS4, chloroplastic

uncharacterized protein

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi01200	Carbon metabolism	3
sbi00620	Pyruvate metabolism	2
sbi00630	Glyoxylate and dicarboxylate metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa00230	Purine metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu03060	Protein export	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma00230	Purine metabolism	3
gma00010	Glycolysis / Gluconeogenesis	2
gma00030	Pentose phosphate pathway	2
gma00052	Galactose metabolism	2
gma00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr01230	Biosynthesis of amino acids	3
mtr00030	Pentose phosphate pathway	2
mtr00710	Carbon fixation by Calvin cycle	2
mtr01200	Carbon metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi03010	Ribosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi03010	Ribosome	4
ghi00130	Ubiquinone and other terpenoid-quinone biosynthesis	2
ghi01240	Biosynthesis of cofactors	2
ghi00340	Histidine metabolism	2
ghi01230	Biosynthesis of amino acids	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna03010	Ribosome	4
bna03015	mRNA surveillance pathway	3
bna00970	Aminoacyl-tRNA biosynthesis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit04136	Autophagy - other	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	6
nta00450	Selenocompound metabolism	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00970	Aminoacyl-tRNA biosynthesis	6
nta00450	Selenocompound metabolism	2
nta00860	Porphyrin metabolism	2
nta01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cre01230	Biosynthesis of amino acids	3
cre00260	Glycine, serine and threonine metabolism	2
cre00400	Phenylalanine, tyrosine and tryptophan biosynthesis	2

Expression

Expression pattern

Entrez Gene ID^*

8074616

110434939

100194346

103630751

4329548

123060753

123069314

123443220

100844596

824782

100779161

101252502

103841521

100262186

100249899

7490902

25483251

107887876

107945744

106432312

102583020

102617407

107765091

107812974

5720153

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 110434939 (sbi-r.1 coexpression data)

Top 50 enrichment test to 110434939 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	ath	gma	sly	vvi	ppo	mtr	bdi	hvu	bra	cit	bna	ghi	sot	nta	cre	tae
Paralog	1	2	1	1	1	1	2	1	1	0	0	0	0	0	0	0	0	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 110434939 (sbi-r.1 coexpression data)

Top 50 enrichment test to 110434939 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**