ATTED-II : GeneCoexpression result

Species	Gene	Description
sbi-r.1	110436328	protein POLYCHOME-like
sbi-r.1	8070583	protein POLYCHOME
sbi-r.1	8055432	protein GIGAS CELL1
zma-u.5	100304364	uncharacterized LOC100304364
zma-u.5	100193114	uncharacterized LOC100193114
zma-u.5	100275429	uncharacterized LOC100275429
osa-u.5	9272490	protein POLYCHOME
osa-u.5	4336133	protein POLYCHOME
tae-r.2	123045739	protein POLYCHOME
tae-r.2	123053607	protein POLYCHOME
tae-r.2	123127550	protein GIGAS CELL1
hvu-r.1	123426985	protein POLYCHOME-like
hvu-r.1	123402727	uncharacterized LOC123402727
bdi-r.1	100836002	protein POLYCHOME
bdi-r.1	100824111	protein GIGAS CELL1
ath-u.5	UVI4	uv-b-insensitive 4
ath-u.5	UVI4-LIKE	UV-B-insensitive 4-like protein
gma-u.5	100816760	protein POLYCHOME
gma-u.5	100805575	protein POLYCHOME
sly-u.5	101260887	protein POLYCHOME
bra-r.6	103866619	protein POLYCHOME
ppo-u.5	7483993	protein POLYCHOME
ppo-u.5	18099861	protein POLYCHOME
mtr-u.5	11428198	protein POLYCHOME
mtr-u.5	120580934	uncharacterized LOC120580934
ghi-r.1	107925722	protein POLYCHOME
ghi-r.1	107923010	protein POLYCHOME
bna-r.1	111215511	protein POLYCHOME
sot-r.1	102593365	protein POLYCHOME
cit-r.1	102606822	protein POLYCHOME
nta-r.1	107769038	protein POLYCHOME-like
nta-r.1	107786481	protein POLYCHOME-like
nta-r.1	107824196	protein POLYCHOME-like

Annotation

functional annotation

KEGG

GO BP

GO:1904667 [list] [network] negative regulation of ubiquitin protein ligase activity	(3 genes)	IEA
GO:0051783 [list] [network] regulation of nuclear division	(20 genes)	IEA

GO CC

GO:0005634 [list] [network] nucleus

(2977 genes)

IEA

GO MF

Protein

XP_021318778.1 [sequence] [blastp]
XP_021318779.1 [sequence] [blastp]
XP_021318780.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 4, nucl_plas 2, chlo 2, mito 2, chlo_mito 2	(predict for XP_021318778.1)
nucl 4, nucl_plas 2, chlo 2, mito 2, chlo_mito 2	(predict for XP_021318779.1)
nucl 4, nucl_plas 2, chlo 2, mito 2, chlo_mito 2	(predict for XP_021318780.1)

Subcellular
localization
TargetP

other 7	(predict for XP_021318778.1)
other 7	(predict for XP_021318779.1)
other 7	(predict for XP_021318780.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	sbi-r.1 for 110436328	sbi-r.1 for 8070583	sbi-r.1 for 8055432	zma-u.5 for 100304364	zma-u.5 for 100193114	zma-u.5 for 100275429	osa-u.5 for 9272490	osa-u.5 for 4336133	tae-r.2 for 123045739	tae-r.2 for 123053607	tae-r.2 for 123127550	hvu-r.1 for 123426985	hvu-r.1 for 123402727	bdi-r.1 for 100836002	bdi-r.1 for 100824111	ath-u.5 for UVI4	ath-u.5 for UVI4-LIKE	gma-u.5 for 100816760	gma-u.5 for 100805575	sly-u.5 for 101260887	bra-r.6 for 103866619	ppo-u.5 for 7483993	ppo-u.5 for 18099861	mtr-u.5 for 11428198	mtr-u.5 for 120580934	ghi-r.1 for 107925722	ghi-r.1 for 107923010	bna-r.1 for 111215511	sot-r.1 for 102593365	cit-r.1 for 102606822	nta-r.1 for 107769038	nta-r.1 for 107786481	nta-r.1 for 107824196

Ortholog

Ortholog ID: 4056

Species

sbi

zma

osa

tae

hvu

bdi

ath

gma

sly

bra

ppo

mtr

ghi

bna

sot

cit

nta

Symbol

UVI4

Function^*

protein POLYCHOME-like

protein POLYCHOME

protein GIGAS CELL1

uncharacterized LOC100304364

uncharacterized LOC100193114

uncharacterized LOC100275429

protein POLYCHOME

protein POLYCHOME-like

uncharacterized LOC123402727

protein POLYCHOME

protein GIGAS CELL1

uv-b-insensitive 4

UV-B-insensitive 4-like protein

protein POLYCHOME

uncharacterized LOC120580934

protein POLYCHOME

protein GIGAS CELL1-like

protein POLYCHOME

protein POLYCHOME-like

Coexmap

Please wait a moment.

Coexpression

Please wait a moment.

KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi03082	ATP-dependent chromatin remodeling	6
sbi03030	DNA replication	4
sbi03420	Nucleotide excision repair	2
sbi03430	Mismatch repair	2
sbi03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
zma03030	DNA replication	7
zma03420	Nucleotide excision repair	4
zma03430	Mismatch repair	4
zma03440	Homologous recombination	3
zma03460	Fanconi anemia pathway	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa03030	DNA replication	3
osa03420	Nucleotide excision repair	2
osa03430	Mismatch repair	2
osa03440	Homologous recombination	2
osa03460	Fanconi anemia pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu00941	Flavonoid biosynthesis	4
hvu04712	Circadian rhythm - plant	4

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
hvu01230	Biosynthesis of amino acids	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bdi03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath03082	ATP-dependent chromatin remodeling	3
ath03440	Homologous recombination	3
ath03460	Fanconi anemia pathway	3
ath03030	DNA replication	2
ath03420	Nucleotide excision repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
gma04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly03440	Homologous recombination	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ghi00230	Purine metabolism	2
ghi00240	Pyrimidine metabolism	2
ghi00760	Nicotinate and nicotinamide metabolism	2
ghi01232	Nucleotide metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04814	Motor proteins	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
cit03082	ATP-dependent chromatin remodeling	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta03440	Homologous recombination	3
nta00310	Lysine degradation	2
nta03030	DNA replication	2
nta03420	Nucleotide excision repair	2
nta03430	Mismatch repair	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	2
nta04517	IgSF CAM signaling	2
nta04814	Motor proteins	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04145	Phagosome	2
nta04517	IgSF CAM signaling	2
nta04814	Motor proteins	2

Expression

Expression pattern

Entrez Gene ID^*

110436328

8070583

8055432

100304364

100193114

100275429

9272490

4336133

123045739

123053607

123189506

123426985

123402727

100836002

100824111

818827

824955

100816760

100805575

101260887

103866619

7483993

18099861

11428198

120580934

107925722

107923010

106451503

102593365

102606822

107769038

107824196

107806643

Select Species^**

Orthologous genes in OrthoFinder^**

Top 50 coexpressed genes to 110436328 (sbi-r.1 coexpression data)

Top 50 enrichment test to 110436328 (sbi-r.1 coexpression data)


Species	sbi	zma	osa	tae	hvu	bdi	ath	gma	sly	bra	ppo	mtr	ghi	bna	sot	cit	nta	cre	vvi
Paralog	3	3	2	3	2	2	2	2	1	1	2	2	2	1	1	1	3	0	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 110436328 (sbi-r.1 coexpression data)

Top 50 enrichment test to 110436328 (sbi-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**