Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 sbi-r.1   110436951   zinc finger CCCH domain-containing protein 55-like 
 zma-u.5   103641333   zinc finger CCCH domain-containing protein 55 
 osa-u.5   4344611   zinc finger CCCH domain-containing protein 55-like 
 ath-u.5   AT3G18640   Zinc finger C-x8-C-x5-C-x3-H type family protein 
 gma-u.5   100803151   zinc finger CCCH domain-containing protein 38 
 gma-u.5   100783856   zinc finger CCCH domain-containing protein 38 
 sly-u.5   101263308   zinc finger CCCH domain-containing protein 38 
 sly-u.5   101262713   zinc finger CCCH domain-containing protein 55 
 vvi-u.5   100267803   zinc finger CCCH domain-containing protein 55 
 ppo-u.5   7466832   zinc finger CCCH domain-containing protein 38 
 ppo-u.5   7477689   zinc finger CCCH domain-containing protein 38 
 mtr-u.5   11438536   zinc finger CCCH domain-containing protein 38 
 mtr-u.5   11435032   zinc finger CCCH domain-containing protein 38 

close


Top 50 coexpressed genes to 110436951 (sbi-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 110436951 (sbi-r.1 coexpression data)

CoexMap"110436951"


sbiLOC110436951 | Entrez gene ID : 110436951    
Species sbi zma osa ath gma sly vvi ppo mtr hvu sot tae nta bra cit ghi bna bdi cre
Paralog 1 1 1 1 2 2 1 2 2 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
GO:0046872 [list] [network] metal ion binding  (2038 genes)  IEA  
Protein XP_021320443.1 [sequence] [blastp]
XP_021320444.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_021320443.1)
nucl 10  (predict for XP_021320444.1)
Subcellular
localization
TargetP
other 8  (predict for XP_021320443.1)
other 8  (predict for XP_021320444.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

sbi-r.1
for
110436951

.
zma-u.5
for
103641333

.
osa-u.5
for
4344611

.
ath-u.5
for
AT3G18640

.
gma-u.5
for
100803151

.
gma-u.5
for
100783856

.
sly-u.5
for
101263308

.
sly-u.5
for
101262713

.
vvi-u.5
for
100267803

.
ppo-u.5
for
7466832

.
ppo-u.5
for
7477689

.
mtr-u.5
for
11438536

.
mtr-u.5
for
11435032

.


Ortholog ID: 6001
Species ath gma sly sly osa zma bra bra vvi ppo ppo mtr mtr tae tae hvu ghi ghi bna bna sbi sot cit bdi nta nta
Symbol AT3G18640 LOC100803151 LOC101262713 LOC101263308 LOC4344611 LOC103641333 LOC103871439 LOC103837943 LOC100267803 LOC7466832 LOC7477689 LOC11435032 LOC11438536 LOC123145775 LOC123128642 LOC123403836 LOC107910672 LOC121210136 LOC106382084 LOC106390289 LOC110436951 LOC102594362 LOC102611021 LOC100827695 LOC107762754 LOC107766755
Function* Zinc finger C-x8-C-x5-C-x3-H type family protein zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55-like zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55-like uncharacterized LOC107910672 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55-like zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 38 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55 zinc finger CCCH domain-containing protein 55-like
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 3
sly03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 2
ppo03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr00310 Lysine degradation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu04141 Protein processing in endoplasmic reticulum 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 2
ghi03082 ATP-dependent chromatin remodeling 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
bna04146 Peroxisome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00310 Lysine degradation 4
bna03082 ATP-dependent chromatin remodeling 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot04141 Protein processing in endoplasmic reticulum 3
sot03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03018 RNA degradation 2
nta03040 Spliceosome 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 821395 100803151 101262713 101263308 4344611 103641333 103871439 103837943 100267803 7466832 7477689 11435032 11438536 123145775 123128642 123403836 107910672 121210136 106382084 106390289 110436951 102594362 102611021 100827695 107762754 107766755
The preparation time of this page was 0.3 [sec].