Select Species**


OK


Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111197874   RNA-binding protein 39 
 ath-u.5   AT2G16940   Splicing factor, CC1-like protein 
 ath-u.5   AT5G09880   Splicing factor, CC1-like protein 
 gma-u.5   100789839   RNA-binding protein 39 
 gma-u.5   100793461   RNA-binding protein 39 
 gma-u.5   100795336   RNA-binding protein 39 
 vvi-u.5   100253813   uncharacterized LOC100253813 
 vvi-u.5   100243992   uncharacterized LOC100243992 
 ppo-u.5   7453655   uncharacterized LOC7453655 
 ppo-u.5   7476432   uncharacterized LOC7476432 
 ppo-u.5   7494232   uncharacterized LOC7494232 
 mtr-u.5   112417170   RNA-binding protein 39 
 mtr-u.5   11423679   RNA-binding protein 39 
 mtr-u.5   11426905   RNA-binding protein 39 
 sly-u.5   101259103   uncharacterized LOC101259103 
 osa-u.5   9269341   uncharacterized LOC9269341 
 osa-u.5   9270364   uncharacterized LOC9270364 
 zma-u.5   100383130   Splicing factor CC1-like 
 zma-u.5   100278875   uncharacterized LOC100278875 
 zma-u.5   100274411   uncharacterized LOC100274411 

close


Top 50 coexpressed genes to 111197874 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

close

close

Top 50 enrichment test to 111197874 (bna-r.1 coexpression data)

CoexMap"111197874"


bnaLOC111197874 | Entrez gene ID : 111197874    
Species bna ath gma vvi ppo mtr sly osa zma sbi nta bra cre hvu cit bdi sot tae ghi
Paralog 1 2 3 2 3 3 1 2 3 0 0 0 0 0 0 0 0 0 0
Show/Hide Columns:        



CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO:0006397 [list] [network] mRNA processing  (684 genes)  IEA  
GO CC
GO:0005634 [list] [network] nucleus  (9971 genes)  IEA  
GO MF
GO:0003723 [list] [network] RNA binding  (3852 genes)  IEA  
Protein XP_022562177.1 [sequence] [blastp]
XP_022562178.1 [sequence] [blastp]
XP_022562179.1 [sequence] [blastp]
XP_022562180.1 [sequence] [blastp]
XP_048620364.1 [sequence] [blastp]
XP_048620365.1 [sequence] [blastp]
XP_048620366.1 [sequence] [blastp]
XP_048620367.1 [sequence] [blastp]
XP_048620368.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 10  (predict for XP_022562177.1)
nucl 10  (predict for XP_022562178.1)
nucl 10  (predict for XP_022562179.1)
nucl 10  (predict for XP_022562180.1)
nucl 10  (predict for XP_048620364.1)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_048620365.1)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_048620366.1)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_048620367.1)
cyto 6,  nucl 3,  cyto_E.R. 3,  cyto_plas 3  (predict for XP_048620368.1)
Subcellular
localization
TargetP
other 8  (predict for XP_022562177.1)
other 8  (predict for XP_022562178.1)
other 8  (predict for XP_022562179.1)
other 8  (predict for XP_022562180.1)
other 8  (predict for XP_048620364.1)
other 9  (predict for XP_048620365.1)
other 9  (predict for XP_048620366.1)
other 9  (predict for XP_048620367.1)
other 9  (predict for XP_048620368.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111197874

.
ath-u.5
for
AT2G16940

.
ath-u.5
for
AT5G09880

.
gma-u.5
for
100789839

.
gma-u.5
for
100793461

.
gma-u.5
for
100795336

.
vvi-u.5
for
100253813

.
vvi-u.5
for
100243992

.
ppo-u.5
for
7453655

.
ppo-u.5
for
7476432

.
ppo-u.5
for
7494232

.
mtr-u.5
for
112417170

.
mtr-u.5
for
11423679

.
mtr-u.5
for
11426905

.
sly-u.5
for
101259103

.
osa-u.5
for
9269341

.
osa-u.5
for
9270364

.
zma-u.5
for
100383130

.
zma-u.5
for
100278875

.
zma-u.5
for
100274411

.


Ortholog ID: 2699
Species ath ath gma gma sly osa osa zma zma bra bra vvi vvi ppo ppo mtr mtr tae tae hvu hvu ghi ghi bna bna cre cre sbi sbi sot cit cit bdi bdi nta nta
Symbol AT2G16940 AT5G09880 LOC100789839 LOC100793461 LOC101259103 LOC9270364 LOC9269341 LOC100278875 LOC100383130 LOC103850353 LOC103846010 LOC100243992 LOC100253813 LOC7494232 LOC7476432 LOC11426905 LOC112417170 LOC123042324 LOC123119138 LOC123449474 LOC123429591 LOC107950593 LOC107908645 LOC106418711 LOC106428697 CHLRE_04g213905v5 CHLRE_17g733208v5 LOC8064864 LOC8080541 LOC102604200 LOC102614661 LOC102610927 LOC100845331 LOC100839727 LOC107772496 LOC107827897
Function* Splicing factor, CC1-like protein Splicing factor, CC1-like protein RNA-binding protein 39 RNA-binding protein 39 uncharacterized LOC101259103 uncharacterized LOC9270364 uncharacterized LOC9269341 uncharacterized LOC100278875 Splicing factor CC1-like RNA-binding protein 39 RNA-binding protein 39 uncharacterized LOC100243992 uncharacterized LOC100253813 uncharacterized LOC7494232 uncharacterized LOC7476432 RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39-like RNA-binding protein 39-like RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39 uncharacterized protein uncharacterized protein RNA-binding protein 39 RNA-binding protein 39 RNA-binding protein 39 uncharacterized LOC102614661 uncharacterized LOC102610927 RNA-binding protein 39 RNA-binding protein 39 uncharacterized LOC107772496 uncharacterized LOC107827897
Coexmap

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
Coexpression

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.

Please wait a moment.
KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 8
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03040 Spliceosome 9
gma03082 ATP-dependent chromatin remodeling 2
gma03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03008 Ribosome biogenesis in eukaryotes 3
gma04120 Ubiquitin mediated proteolysis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03040 Spliceosome 4
zma03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 2
bra03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 7
vvi03013 Nucleocytoplasmic transport 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 3
ppo03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03008 Ribosome biogenesis in eukaryotes 7
mtr03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03040 Spliceosome 2
mtr00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03015 mRNA surveillance pathway 2
hvu03013 Nucleocytoplasmic transport 2
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04075 Plant hormone signal transduction 2
ghi03022 Basal transcription factors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03040 Spliceosome 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cre03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 4
sbi04122 Sulfur relay system 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot03013 Nucleocytoplasmic transport 2
sot03015 mRNA surveillance pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 4
bdi03013 Nucleocytoplasmic transport 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03040 Spliceosome 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 6
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03040 Spliceosome 5
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 816197 830848 100789839 100793461 101259103 9270364 9269341 100278875 100383130 103850353 103846010 100243992 100253813 7494232 7476432 11426905 112417170 123042324 123119138 123449474 123429591 107950593 107908645 106418711 106428697 66053121 5725114 8064864 8080541 102604200 102614661 102610927 100845331 100839727 107772496 107827897
The preparation time of this page was 0.2 [sec].