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Orthologous genes in OrthoFinder**

Species Gene Description
 ath-u.5   AT4G28890   RING/U-box superfamily protein 
 gma-u.5   100806950   E3 ubiquitin-protein ligase ATL42-like 
 gma-u.5   100803207   E3 ubiquitin-protein ligase ATL42 
 vvi-u.5   100244010   E3 ubiquitin-protein ligase ATL42 
 mtr-u.5   25490128   E3 ubiquitin-protein ligase ATL42 
 mtr-u.5   11439998   E3 ubiquitin-protein ligase ATL42 
 osa-u.5   4339820   putative RING-H2 finger protein ATL12 
 zma-u.5   103630821   E3 ubiquitin-protein ligase ATL42 

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Top 50 coexpressed genes to AT4G28890 (ath-u.5 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to AT4G28890 (ath-u.5 coexpression data)

CoexMap"111207889"


bnaLOC111207889 | Entrez gene ID : 111207889    
Species ath gma vvi mtr osa zma bdi hvu bra cit bna ppo sbi sly ghi sot nta cre tae
Paralog 1 2 1 2 1 1 0 0 0 0 0 0 0 0 0 0 0 0 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG
GO BP
GO CC
GO MF
Protein XP_048618611.1 [sequence] [blastp]
Subcellular
localization
wolf
extr 6,  cyto 1,  mito 1,  plas 1,  vacu 1,  E.R. 1,  E.R._vacu 1,  E.R._plas 1,  mito_plas 1,  cyto_E.R. 1,  cyto_plas 1  (predict for XP_048618611.1)
Subcellular
localization
TargetP
scret 9,  other 3  (predict for XP_048618611.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

ath-u.5
for
AT4G28890
gma-u.5
for
100806950
gma-u.5
for
100803207
vvi-u.5
for
100244010
mtr-u.5
for
25490128
mtr-u.5
for
11439998
osa-u.5
for
4339820
zma-u.5
for
103630821


Ortholog ID: 2977
Species bna ath ghi cit gma vvi mtr mtr sot nta nta osa zma hvu sbi
Symbol LOC106359823 AT4G28890 LOC107932980 LOC102618502 LOC100806950 LOC100244010 LOC11439998 LOC25490128 LOC102600705 LOC107775242 LOC107770747 LOC4339820 LOC103630821 LOC123422042 LOC8065344
Function* E3 ubiquitin-protein ligase ATL42-like RING/U-box superfamily protein E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42 E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42-like E3 ubiquitin-protein ligase ATL42-like putative RING-H2 finger protein ATL12 E3 ubiquitin-protein ligase ATL42 putative RING-H2 finger protein ATL12 putative RING-H2 finger protein ATL12
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi02010 ABC transporters 4
ghi04981 Folate transport and metabolism 4
ghi00905 Brassinosteroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00480 Glutathione metabolism 3
gma04075 Plant hormone signal transduction 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi00945 Stilbenoid, diarylheptanoid and gingerol biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot00902 Monoterpenoid biosynthesis 3
sot00480 Glutathione metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 5
nta04626 Plant-pathogen interaction 5
nta00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00062 Fatty acid elongation 5
nta04626 Plant-pathogen interaction 5
nta00073 Cutin, suberine and wax biosynthesis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04075 Plant hormone signal transduction 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma00940 Phenylpropanoid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04075 Plant hormone signal transduction 3
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106359823 829010 107932980 102618502 100806950 100244010 11439998 25490128 102600705 107775242 107770747 4339820 103630821 123422042 8065344
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