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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   111212460   choline-phosphate cytidylyltransferase 2-like 
 bna-r.1   106446987   choline-phosphate cytidylyltransferase 2 
 bna-r.1   106437698   choline-phosphate cytidylyltransferase 1-like 
 bra-r.6   103867630   choline-phosphate cytidylyltransferase 1 
 bra-r.6   103857417   choline-phosphate cytidylyltransferase 1 
 bra-r.6   103847616   choline-phosphate cytidylyltransferase 2 
 ath-u.5   CCT1   phosphorylcholine cytidylyltransferase 
 ath-u.5   CCT2   phosphorylcholine cytidylyltransferase2 
 ghi-r.1   107954865   choline-phosphate cytidylyltransferase 1 
 ghi-r.1   107955684   choline-phosphate cytidylyltransferase 1 
 cit-r.1   102628293   choline-phosphate cytidylyltransferase 2-like 
 cit-r.1   102627169   choline-phosphate cytidylyltransferase 1 
 gma-u.5   100786249   choline-phosphate cytidylyltransferase 1 
 gma-u.5   100791886   choline-phosphate cytidylyltransferase B-like 
 vvi-u.5   100267395   choline-phosphate cytidylyltransferase 2 
 vvi-u.5   100245839   choline-phosphate cytidylyltransferase 1 
 ppo-u.5   7455848   choline-phosphate cytidylyltransferase 2 
 ppo-u.5   7458479   choline-phosphate cytidylyltransferase 1 
 ppo-u.5   7461969   choline-phosphate cytidylyltransferase 1 
 mtr-u.5   25489647   choline-phosphate cytidylyltransferase 2 
 mtr-u.5   11438697   choline-phosphate cytidylyltransferase 1 
 sly-u.5   101264888   choline-phosphate cytidylyltransferase 1 
 sot-r.1   102585509   choline-phosphate cytidylyltransferase 1-like 
 sot-r.1   102605049   choline-phosphate cytidylyltransferase 1-like 
 nta-r.1   107816866   choline-phosphate cytidylyltransferase 2 
 nta-r.1   107779719   choline-phosphate cytidylyltransferase 2 
 nta-r.1   107760631   choline-phosphate cytidylyltransferase 2-like 
 osa-u.5   4349510   choline-phosphate cytidylyltransferase 2 
 osa-u.5   4328455   choline-phosphate cytidylyltransferase 1 
 zma-u.5   100283945   choline-phosphate cytidylyltransferase B 
 zma-u.5   100273724   uncharacterized LOC100273724 
 tae-r.2   123136627   choline-phosphate cytidylyltransferase 2 
 tae-r.2   123144138   choline-phosphate cytidylyltransferase 2 
 tae-r.2   123050771   choline-phosphate cytidylyltransferase 2 
 hvu-r.1   123401470   choline-phosphate cytidylyltransferase 2-like 
 hvu-r.1   123436836   choline-phosphate cytidylyltransferase 2-like 
 sbi-r.1   8076124   choline-phosphate cytidylyltransferase 1 
 sbi-r.1   8055124   choline-phosphate cytidylyltransferase 2 
 bdi-r.1   100842053   choline-phosphate cytidylyltransferase 2 
 bdi-r.1   100825926   choline-phosphate cytidylyltransferase 1 

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Top 50 coexpressed genes to 111212460 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 111212460 (bna-r.1 coexpression data)

CoexMap"111212460"


bnaLOC111212460 | Entrez gene ID : 111212460    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 3 3 2 2 2 2 2 3 2 1 2 3 2 2 3 2 2 2 0
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna00440 [list] [network] Phosphonate and phosphinate metabolism (31 genes)
bna00564 [list] [network] Glycerophospholipid metabolism (347 genes)
GO BP
GO:0006657 [list] [network] CDP-choline pathway  (12 genes)  IEA  
GO CC
GO MF
GO:0004105 [list] [network] choline-phosphate cytidylyltransferase activity  (12 genes)  IEA  
GO:0031210 [list] [network] phosphatidylcholine binding  (12 genes)  IEA  
Protein XP_048600872.1 [sequence] [blastp]
XP_048600873.1 [sequence] [blastp]
XP_048600874.1 [sequence] [blastp]
Subcellular
localization
wolf
cysk 6,  cyto 3  (predict for XP_048600872.1)
cyto 4,  chlo 3,  cyto_nucl 3  (predict for XP_048600873.1)
cyto 4,  nucl 3,  cyto_pero 3  (predict for XP_048600874.1)
Subcellular
localization
TargetP
other 8  (predict for XP_048600872.1)
chlo 6,  other 5  (predict for XP_048600873.1)
other 9  (predict for XP_048600874.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
111212460
bna-r.1
for
106446987
bna-r.1
for
106437698
bra-r.6
for
103867630
bra-r.6
for
103857417
bra-r.6
for
103847616
ath-u.5
for
CCT1
ath-u.5
for
CCT2
ghi-r.1
for
107954865
ghi-r.1
for
107955684
cit-r.1
for
102628293
cit-r.1
for
102627169
gma-u.5
for
100786249
gma-u.5
for
100791886
vvi-u.5
for
100267395
vvi-u.5
for
100245839
ppo-u.5
for
7455848
ppo-u.5
for
7458479
ppo-u.5
for
7461969
mtr-u.5
for
25489647
mtr-u.5
for
11438697
sly-u.5
for
101264888
sot-r.1
for
102585509
sot-r.1
for
102605049
nta-r.1
for
107816866
nta-r.1
for
107779719
nta-r.1
for
107760631
osa-u.5
for
4349510
osa-u.5
for
4328455
zma-u.5
for
100283945
zma-u.5
for
100273724
tae-r.2
for
123136627
tae-r.2
for
123144138
tae-r.2
for
123050771
hvu-r.1
for
123401470
hvu-r.1
for
123436836
sbi-r.1
for
8076124
sbi-r.1
for
8055124
bdi-r.1
for
100842053
bdi-r.1
for
100825926


Ortholog ID: 2394
Species bna bna bra bra bra ath ath ghi ghi cit cit gma gma vvi vvi ppo ppo ppo mtr mtr sly sot sot nta nta nta osa osa zma zma tae tae tae hvu hvu sbi sbi bdi bdi
Symbol LOC106387975 LOC106380581 LOC103857417 LOC103847616 LOC103843610 CCT1 CCT2 LOC107954865 LOC107955684 LOC102628293 LOC102627169 LOC100786249 LOC100791886 LOC100267395 LOC100245839 LOC7455848 LOC7461969 LOC18094638 LOC25489647 LOC11438697 LOC101264888 LOC102585509 LOC102605049 LOC107816866 LOC107779719 LOC107768888 LOC4349510 LOC4328455 LOC100283945 LOC100273724 LOC123136627 LOC123050771 LOC123132553 LOC123401470 LOC123436836 LOC8076124 LOC8055124 LOC100842053 LOC100825926
Function* choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 phosphorylcholine cytidylyltransferase phosphorylcholine cytidylyltransferase2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase B-like choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 1-like choline-phosphate cytidylyltransferase 1-like choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase B uncharacterized LOC100273724 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 2-like choline-phosphate cytidylyltransferase 1 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 2 choline-phosphate cytidylyltransferase 1
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00440 Phosphonate and phosphinate metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna00440 Phosphonate and phosphinate metabolism 4
bna00564 Glycerophospholipid metabolism 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04130 SNARE interactions in vesicular transport 2
bra03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra04120 Ubiquitin mediated proteolysis 3
bra00480 Glutathione metabolism 2
bra00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03040 Spliceosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04070 Phosphatidylinositol signaling system 4
ghi04626 Plant-pathogen interaction 4
ghi04144 Endocytosis 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi04016 MAPK signaling pathway - plant 6
ghi04075 Plant hormone signal transduction 6
ghi04070 Phosphatidylinositol signaling system 4
ghi04626 Plant-pathogen interaction 4
ghi04144 Endocytosis 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03010 Ribosome 4
cit00190 Oxidative phosphorylation 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma00440 Phosphonate and phosphinate metabolism 2
gma00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03008 Ribosome biogenesis in eukaryotes 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03020 RNA polymerase 3
ppo03420 Nucleotide excision repair 3
ppo04120 Ubiquitin mediated proteolysis 3
ppo04141 Protein processing in endoplasmic reticulum 3
ppo03083 Polycomb repressive complex 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03040 Spliceosome 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr04144 Endocytosis 5
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03040 Spliceosome 5
sot00440 Phosphonate and phosphinate metabolism 2
sot00564 Glycerophospholipid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00330 Arginine and proline metabolism 2
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04144 Endocytosis 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta04144 Endocytosis 8
nta03272 Virion - Hepatitis viruses 4
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta03250 Viral life cycle - HIV-1 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta00440 Phosphonate and phosphinate metabolism 2
nta00564 Glycerophospholipid metabolism 2
nta04144 Endocytosis 2
nta00100 Steroid biosynthesis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa00062 Fatty acid elongation 3
osa04626 Plant-pathogen interaction 3
osa01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa04130 SNARE interactions in vesicular transport 3
osa04144 Endocytosis 2
osa03040 Spliceosome 2
osa04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma04016 MAPK signaling pathway - plant 3
zma04075 Plant hormone signal transduction 3
zma00240 Pyrimidine metabolism 2
zma01232 Nucleotide metabolism 2
zma01240 Biosynthesis of cofactors 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 6
zma03420 Nucleotide excision repair 3
zma03430 Mismatch repair 3
zma03440 Homologous recombination 2
zma03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae04016 MAPK signaling pathway - plant 4
tae00440 Phosphonate and phosphinate metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae01200 Carbon metabolism 7
tae01230 Biosynthesis of amino acids 7
tae00010 Glycolysis / Gluconeogenesis 6
tae00051 Fructose and mannose metabolism 5
tae03018 RNA degradation 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae04075 Plant hormone signal transduction 7
tae04016 MAPK signaling pathway - plant 4
tae00440 Phosphonate and phosphinate metabolism 3
tae00564 Glycerophospholipid metabolism 3
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu00061 Fatty acid biosynthesis 2
hvu01212 Fatty acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu01200 Carbon metabolism 3
hvu00071 Fatty acid degradation 2
hvu00592 alpha-Linolenic acid metabolism 2
hvu01212 Fatty acid metabolism 2
hvu01210 2-Oxocarboxylic acid metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04141 Protein processing in endoplasmic reticulum 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi04144 Endocytosis 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi04141 Protein processing in endoplasmic reticulum 3
bdi03060 Protein export 3
bdi00520 Amino sugar and nucleotide sugar metabolism 2
bdi01250 Biosynthesis of nucleotide sugars 2
bdi04145 Phagosome 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03013 Nucleocytoplasmic transport 2
bdi04144 Endocytosis 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106387975 106380581 103857417 103847616 103843610 817786 827179 107954865 107955684 102628293 102627169 100786249 100791886 100267395 100245839 7455848 7461969 18094638 25489647 11438697 101264888 102585509 102605049 107816866 107779719 107768888 4349510 4328455 100283945 100273724 123136627 123050771 123132553 123401470 123436836 8076124 8055124 100842053 100825926
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