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Orthologous genes in OrthoFinder**

Species Gene Description
 bna-r.1   106376473   DNA primase small subunit-like 
 bna-r.1   106446323   DNA primase small subunit-like 
 bra-r.6   103864126   DNA primase small subunit 
 ath-u.5   POLA3   DNA primase POLA3 
 ghi-r.1   107947091   DNA primase small subunit 
 ghi-r.1   107947115   DNA primase small subunit 
 cit-r.1   102613266   uncharacterized LOC102613266 
 gma-u.5   100780574   DNA primase small subunit 
 vvi-u.5   100260326   uncharacterized LOC100260326 
 ppo-u.5   7465480   uncharacterized LOC7465480 
 mtr-u.5   11439115   DNA primase small subunit 
 sly-u.5   101258292   uncharacterized LOC101258292 
 sot-r.1   102590488   DNA primase small subunit 
 nta-r.1   107779384   uncharacterized LOC107779384 
 nta-r.1   107784359   uncharacterized LOC107784359 
 osa-u.5   9267485   uncharacterized LOC9267485 
 zma-u.5   103631463   DNA primase small subunit 
 tae-r.2   123181755   DNA primase small subunit 
 tae-r.2   123129425   DNA primase small subunit 
 tae-r.2   123052974   DNA primase small subunit 
 hvu-r.1   123440754   DNA primase small subunit-like 
 sbi-r.1   8061908   DNA primase small subunit 
 bdi-r.1   100835644   DNA primase small subunit 
 bdi-r.1   100824089   DNA primase small subunit-like 
 cre-r.1   CHLRE_07g312350v5   uncharacterized protein 

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Top 50 coexpressed genes to 106376473 (bna-r.1 coexpression data)

 KEGG ID   Pathway name   #genes in coex list   #genes in genome   -log10(p)   Link to the KEGG* map 
(Multiple genes)

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Top 50 enrichment test to 106376473 (bna-r.1 coexpression data)

CoexMap"111213659"


bnaLOC111213659 | Entrez gene ID : 111213659    
Species bna bra ath ghi cit gma vvi ppo mtr sly sot nta osa zma tae hvu sbi bdi cre
Paralog 2 1 1 2 1 1 1 1 1 1 1 2 1 1 3 1 1 2 1
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CoexMap
Chloroplast
Nucleus

functional annotation
KEGG bna03030 [list] [network] DNA replication (118 genes)
GO BP
GO:0006269 [list] [network] DNA replication, synthesis of primer  (7 genes)  IEA  
GO CC
GO:0005658 [list] [network] alpha DNA polymerase:primase complex  (14 genes)  IEA  
GO MF
Protein XP_048616971.1 [sequence] [blastp]
XP_048616972.1 [sequence] [blastp]
Subcellular
localization
wolf
nucl 6,  cyto 2,  vacu 1,  pero 1,  cysk 1  (predict for XP_048616971.1)
nucl 6,  cyto 2,  vacu 1,  pero 1,  cysk 1  (predict for XP_048616972.1)
Subcellular
localization
TargetP
other 9  (predict for XP_048616971.1)
other 9  (predict for XP_048616972.1)
Gene expression
All samples [Expression pattern]
Tissue specificity*
Show Coexpressed Genes
Gene Function KEGG Entrez
Gene
ID		 Other ID Link Target Reference

bna-r.1
for
106376473
bna-r.1
for
106446323
bra-r.6
for
103864126
ath-u.5
for
POLA3
ghi-r.1
for
107947091
ghi-r.1
for
107947115
cit-r.1
for
102613266
gma-u.5
for
100780574
vvi-u.5
for
100260326
ppo-u.5
for
7465480
mtr-u.5
for
11439115
sly-u.5
for
101258292
sot-r.1
for
102590488
nta-r.1
for
107779384
nta-r.1
for
107784359
osa-u.5
for
9267485
zma-u.5
for
103631463
tae-r.2
for
123181755
tae-r.2
for
123129425
tae-r.2
for
123052974
hvu-r.1
for
123440754
sbi-r.1
for
8061908
bdi-r.1
for
100835644
bdi-r.1
for
100824089
cre-r.1
for
CHLRE_07g312350v5


Ortholog ID: 8176
Species bna bra ath ghi ghi cit gma vvi ppo mtr sly sot nta nta osa zma tae tae tae hvu sbi bdi bdi cre
Symbol LOC106376473 LOC103864126 POLA3 LOC107947091 LOC107947115 LOC102613266 LOC100780574 LOC100260326 LOC7465480 LOC11439115 LOC101258292 LOC102590488 LOC107779384 LOC107784359 LOC9267485 LOC103631463 LOC123181755 LOC123129425 LOC123052974 LOC123440754 LOC8061908 LOC100835644 LOC100824089 CHLRE_07g312350v5
Function* DNA primase small subunit-like DNA primase small subunit DNA primase POLA3 DNA primase small subunit DNA primase small subunit uncharacterized LOC102613266 DNA primase small subunit uncharacterized LOC100260326 uncharacterized LOC7465480 DNA primase small subunit uncharacterized LOC101258292 DNA primase small subunit uncharacterized LOC107779384 uncharacterized LOC107784359 uncharacterized LOC9267485 DNA primase small subunit DNA primase small subunit DNA primase small subunit DNA primase small subunit DNA primase small subunit-like DNA primase small subunit DNA primase small subunit DNA primase small subunit-like uncharacterized protein
Coexmap

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Coexpression

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KEGG Info
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bna03030 DNA replication 12
bna03430 Mismatch repair 5
bna03460 Fanconi anemia pathway 3
bna03410 Base excision repair 2
bna03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bra03030 DNA replication 13
bra03420 Nucleotide excision repair 3
bra03430 Mismatch repair 3
bra03440 Homologous recombination 2
bra03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ath03030 DNA replication 10
ath03420 Nucleotide excision repair 5
ath03430 Mismatch repair 5
ath03440 Homologous recombination 4
ath03460 Fanconi anemia pathway 4
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ghi03030 DNA replication 11
ghi03420 Nucleotide excision repair 2
ghi03430 Mismatch repair 2
ghi03440 Homologous recombination 2
ghi03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
cit03030 DNA replication 5
cit03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
gma03030 DNA replication 11
gma00240 Pyrimidine metabolism 2
gma01232 Nucleotide metabolism 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
vvi03030 DNA replication 9
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
ppo03030 DNA replication 9
ppo03440 Homologous recombination 3
ppo03410 Base excision repair 2
ppo03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
mtr03030 DNA replication 13
mtr03420 Nucleotide excision repair 4
mtr03430 Mismatch repair 3
mtr03440 Homologous recombination 3
mtr03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sly03030 DNA replication 11
sly03420 Nucleotide excision repair 2
sly03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sot03030 DNA replication 11
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 7
nta03440 Homologous recombination 4
nta03420 Nucleotide excision repair 2
nta03430 Mismatch repair 2
nta03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
nta03030 DNA replication 14
nta03440 Homologous recombination 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
osa03030 DNA replication 11
osa03420 Nucleotide excision repair 3
osa03430 Mismatch repair 2
osa03440 Homologous recombination 2
osa03460 Fanconi anemia pathway 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
zma03030 DNA replication 13
zma03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 14
tae03430 Mismatch repair 3
tae03410 Base excision repair 2
tae03420 Nucleotide excision repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
tae03030 DNA replication 11
tae03410 Base excision repair 3
tae03420 Nucleotide excision repair 3
tae03020 RNA polymerase 3
tae03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
hvu03008 Ribosome biogenesis in eukaryotes 4
hvu03030 DNA replication 2
hvu04814 Motor proteins 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
sbi03030 DNA replication 12
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 10
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
KEGG* ID Title #genes Link to the KEGG* map
(Multiple genes)
bdi03030 DNA replication 8
bdi03440 Homologous recombination 4
bdi03460 Fanconi anemia pathway 3
bdi03420 Nucleotide excision repair 2
bdi03430 Mismatch repair 2
Expression Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern Expression pattern
Entrez Gene ID* 106376473 103864126 834193 107947091 107947115 102613266 100780574 100260326 7465480 11439115 101258292 102590488 107779384 107784359 9267485 103631463 123181755 123129425 123052974 123440754 8061908 100835644 100824089 5726324
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