ATTED-II : GeneCoexpression result

Select Species^**

Orthologous genes in OrthoFinder^**

Species	Gene	Description
bna-r.1	111213747	uncharacterized LOC111213747
bna-r.1	106406614	uncharacterized LOC106406614
bna-r.1	BNAA05G11690D	uncharacterized BNAA05G11690D
bna-r.1	106348361	uncharacterized LOC106348361
bra-r.6	103865095	uncharacterized LOC103865095
bra-r.6	103867920	uncharacterized LOC103867920
ath-u.5	AT2G30990	arginine N-methyltransferase, putative (DUF688)
ghi-r.1	107913156	uncharacterized LOC107913156
cit-r.1	102629060	uncharacterized LOC102629060
cit-r.1	102610214	uncharacterized LOC102610214
gma-u.5	102660500	uncharacterized LOC102660500
gma-u.5	102665249	uncharacterized LOC102665249
gma-u.5	100782650	uncharacterized LOC100782650
vvi-u.5	100253264	uncharacterized LOC100253264
vvi-u.5	100245463	uncharacterized LOC100245463
ppo-u.5	7455904	uncharacterized LOC7455904
ppo-u.5	7458007	uncharacterized LOC7458007
ppo-u.5	7470205	uncharacterized LOC7470205
mtr-u.5	11422134	uncharacterized LOC11422134
mtr-u.5	25485969	uncharacterized LOC25485969
mtr-u.5	25492575	uncharacterized LOC25492575
sly-u.5	101247686	uncharacterized LOC101247686
sly-u.5	101253258	uncharacterized LOC101253258
sly-u.5	101245858	uncharacterized LOC101245858
sot-r.1	102584213	uncharacterized LOC102584213
sot-r.1	102602497	uncharacterized LOC102602497
sot-r.1	102585343	uncharacterized LOC102585343
nta-r.1	107810776	uncharacterized LOC107810776
nta-r.1	107806799	uncharacterized LOC107806799
nta-r.1	107800398	uncharacterized LOC107800398
osa-u.5	4325608	uncharacterized LOC4325608
zma-u.5	103651188	uncharacterized LOC103651188
tae-r.2	123070837	uncharacterized LOC123070837
tae-r.2	123062111	uncharacterized LOC123062111
tae-r.2	123079228	uncharacterized LOC123079228
hvu-r.1	123444452	uncharacterized LOC123444452
sbi-r.1	8079224	uncharacterized LOC8079224
bdi-r.1	100822855	uncharacterized LOC100822855

Top 50 coexpressed genes to 111213747 (bna-r.1 coexpression data)

KEGG ID	Pathway name	#genes in coex list	#genes in genome	-log10(p)	Link to the KEGG^* map (Multiple genes)

Top 50 enrichment test to 111213747 (bna-r.1 coexpression data)

CoexMap"111213747"

[Cytoscape]

Annotation

functional annotation

KEGG

GO BP

GO CC

GO MF

Protein

XP_048610244.1 [sequence] [blastp]
XP_048610245.1 [sequence] [blastp]
XP_048610246.1 [sequence] [blastp]
XP_048610247.1 [sequence] [blastp]
XP_048610248.1 [sequence] [blastp]

Subcellular
localization
wolf

nucl 7, chlo 1, cyto 1, mito 1, golg 1, chlo_mito 1	(predict for XP_048610244.1)
nucl 8, cyto 1, mito 1, golg 1	(predict for XP_048610245.1)
nucl 6, cyto 2, chlo 1, cyto_plas 1	(predict for XP_048610246.1)
nucl 6, cyto 2, chlo 1, cyto_plas 1	(predict for XP_048610247.1)
nucl 6, cyto 2, chlo 1, cyto_plas 1	(predict for XP_048610248.1)

Subcellular
localization
TargetP

other 4, chlo 3	(predict for XP_048610244.1)
other 4	(predict for XP_048610245.1)
other 4	(predict for XP_048610246.1)
other 4	(predict for XP_048610247.1)
other 4	(predict for XP_048610248.1)

Gene expression

All samples

[Expression pattern]

Tissue specificity^*

Coexpression

	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	Target	Reference
	Gene	Function	KEGG					Entrez Gene ID	Other ID	Link	bna-r.1 for 111213747	bna-r.1 for 106406614	bna-r.1 for BNAA05G11690D	bna-r.1 for 106348361	bra-r.6 for 103865095	bra-r.6 for 103867920	ath-u.5 for AT2G30990	ghi-r.1 for 107913156	cit-r.1 for 102629060	cit-r.1 for 102610214	gma-u.5 for 102660500	gma-u.5 for 102665249	gma-u.5 for 100782650	vvi-u.5 for 100253264	vvi-u.5 for 100245463	ppo-u.5 for 7455904	ppo-u.5 for 7458007	ppo-u.5 for 7470205	mtr-u.5 for 11422134	mtr-u.5 for 25485969	mtr-u.5 for 25492575	sly-u.5 for 101247686	sly-u.5 for 101253258	sly-u.5 for 101245858	sot-r.1 for 102584213	sot-r.1 for 102602497	sot-r.1 for 102585343	nta-r.1 for 107810776	nta-r.1 for 107806799	nta-r.1 for 107800398	osa-u.5 for 4325608	zma-u.5 for 103651188	tae-r.2 for 123070837	tae-r.2 for 123062111	tae-r.2 for 123079228	hvu-r.1 for 123444452	sbi-r.1 for 8079224	bdi-r.1 for 100822855

Ortholog

Ortholog ID: 2989

Species

bna

bra

ath

ghi

cit

gma

vvi

ppo

mtr

sly

sot

nta

osa

zma

tae

hvu

sbi

bdi

Symbol

Function^*

uncharacterized BNAA05G11690D

uncharacterized LOC106348361

shaggy-related protein kinase gamma-like

uncharacterized LOC103865095

uncharacterized LOC103867920

arginine N-methyltransferase, putative (DUF688)

uncharacterized LOC107934048

uncharacterized LOC107945478

uncharacterized LOC102629060

uncharacterized LOC102610214

uncharacterized LOC102665249

uncharacterized LOC100782650

uncharacterized LOC100253264

uncharacterized LOC100245463

uncharacterized LOC7455904

uncharacterized LOC7458007

uncharacterized LOC7470205

uncharacterized LOC25485969

uncharacterized LOC25492575

uncharacterized LOC11414126

uncharacterized LOC101247686

uncharacterized LOC101253258

uncharacterized LOC101245858

uncharacterized LOC102584213

uncharacterized LOC102602497

uncharacterized LOC102585343

uncharacterized LOC107806799

uncharacterized LOC107800398

uncharacterized LOC107802180

uncharacterized LOC4325608

uncharacterized LOC103651188

uncharacterized LOC123070837

uncharacterized LOC123062111

uncharacterized LOC123079228

uncharacterized LOC123444452

uncharacterized LOC8079224

uncharacterized LOC100822855

Coexmap

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Coexpression

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KEGG Info

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna00240	Pyrimidine metabolism	6
bna00410	beta-Alanine metabolism	6
bna00770	Pantothenate and CoA biosynthesis	6
bna04075	Plant hormone signal transduction	3
bna04142	Lysosome	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bna04075	Plant hormone signal transduction	3
bna00240	Pyrimidine metabolism	3
bna00410	beta-Alanine metabolism	3
bna00770	Pantothenate and CoA biosynthesis	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
bra00600	Sphingolipid metabolism	2
bra04142	Lysosome	2
bra01240	Biosynthesis of cofactors	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ath02010	ABC transporters	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
vvi03018	RNA degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo04075	Plant hormone signal transduction	4
ppo00040	Pentose and glucuronate interconversions	3
ppo04016	MAPK signaling pathway - plant	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo03015	mRNA surveillance pathway	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
ppo00040	Pentose and glucuronate interconversions	5

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
mtr00500	Starch and sucrose metabolism	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly00040	Pentose and glucuronate interconversions	2
sly00500	Starch and sucrose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sly04075	Plant hormone signal transduction	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sot00040	Pentose and glucuronate interconversions	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta04141	Protein processing in endoplasmic reticulum	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00310	Lysine degradation	2
nta03083	Polycomb repressive complex	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
nta00040	Pentose and glucuronate interconversions	4
nta00051	Fructose and mannose metabolism	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
osa04144	Endocytosis	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04626	Plant-pathogen interaction	3
tae00531	Glycosaminoglycan degradation	2

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
tae04016	MAPK signaling pathway - plant	3
tae04626	Plant-pathogen interaction	3

KEGG^* ID	Title	#genes	Link to the KEGG^* map (Multiple genes)
sbi00520	Amino sugar and nucleotide sugar metabolism	4
sbi01250	Biosynthesis of nucleotide sugars	4
sbi00040	Pentose and glucuronate interconversions	2
sbi00053	Ascorbate and aldarate metabolism	2
sbi00541	Biosynthesis of various nucleotide sugars	2

Expression

Expression pattern

Entrez Gene ID^*

106451369

106348361

106454857

103865095

103867920

817650

107934048

107945478

102629060

102610214

102665249

100782650

100253264

100245463

7455904

7458007

7470205

25485969

25492575

11414126

101247686

101253258

101245858

102584213

102602497

102585343

107806799

107800398

107802180

4325608

103651188

123070837

123062111

123079228

123444452

8079224

100822855

The preparation time of this page was 0.3 [sec].


Species	bna	bra	ath	ghi	cit	gma	vvi	ppo	mtr	sly	sot	nta	osa	zma	tae	hvu	sbi	bdi	cre
Paralog	4	2	1	1	2	3	2	3	3	3	3	3	1	1	3	1	1	1	0

Select Species**

Orthologous genes in OrthoFinder**

Top 50 coexpressed genes to 111213747 (bna-r.1 coexpression data)

Top 50 enrichment test to 111213747 (bna-r.1 coexpression data)

Select Species^**

Orthologous genes in OrthoFinder^**